Cryptomeria japonica (Japanese cedar): 131040829
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Entry
131040829 CDS
T10556
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03015
mRNA surveillance pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131040829
09122 Translation
03015 mRNA surveillance pathway
131040829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131040829
Spliceosome [BR:
cjf03041
]
Complex A
Other components
Complex A specific factors
131040829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
131040829
NCBI-ProteinID:
XP_057829768
LinkDB
All DBs
Position
7:667788041..667792515
Genome browser
AA seq
439 aa
AA seq
DB search
MSNFDGAPDDGGSRGGYGGGRGGYGGGDRRGGGAQRGGGRGPQRDGDWVCPNPGCGNVNF
ARRTECNKCGTPNSSTGGEQGGSGGFARGGSYGGQGRSNNGGSGYGGGRGGSGYGGQGAD
GAIGTYGNQGGPPPPYGGAPAGGYTGQYSEPSMPPAGTGYANPSAGGYSGTPSYGAPAPP
PSAGYGAPNAYSQPNSYGAPPASFGAAAPSGGRGPGGPAGFDSYGARGYSDARVNPRDDS
RTLPGGYGAVSDAAKVKQCDENCGDTCDNSRIYISNLPLDVTTDELRDLFGGIGQVGRIK
QKRGYKDQWPWNIKIYRDDQGNSKGDAVLSYEDPSAAHSAGGFYNDYVMRGHKINVAMAE
KSAPRAPAAQSGFGSGGGNRGRGGYGDRNRDSYGGDRKRDSYGGDRNRDGRDGHGGDTGG
YGGGGPDRRHGGGQRSRPY
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattttgatggggctcctgacgatggcggtagccgaggaggatatggcggcggc
cgaggtgggtatggtggtggtgaccgcagaggaggaggtgcccaaagaggaggagggaga
ggtccacagcgtgatggggattgggtttgccctaatccaggatgtggtaatgtgaacttc
gcaagaagaacagagtgcaataaatgtggaacacctaattcaagtacaggaggtgaacag
ggtggtagtggtggcttcgcaaggggtgggagctatggaggacagggcaggagcaacaat
ggaggcagtggatatggtggtggaagaggtggaagtggatatggaggccagggtgctgac
ggagcaatcggaacatatggaaaccagggtggtccgccccctccatatggtggtgcacca
gctggaggctatactggtcagtattcagagccatcaatgccccctgctggaacggggtat
gcaaacccgtctgctggtggctatagtggaacacctagctatggagcgccagctccacca
cccagtgctggttacggtgcaccgaatgcatattcccaacctaatagctatggtgctcct
cccgcaagtttcggagcagcagcaccatctggtggtaggggccctgggggtcctgcaggt
tttgacagttatggggctagagggtattcagatgctagggttaatccaagggatgattcg
aggactctgcctggaggttatggtgcagtgtctgatgcagcaaaagtcaaacagtgtgac
gagaactgtggagatacttgcgataactccagaatatatatttctaatttacctctggat
gttacaactgatgaactgagggatctctttggaggaattggccaggtgggaaggatcaag
cagaaacgtggttacaaagatcagtggccgtggaacattaaaatctacagagatgaccaa
ggtaacagcaaaggtgatgctgtcctatcatacgaggatccatctgctgcacattctgca
ggcggcttttacaatgattatgtaatgagaggtcacaagataaatgtggcaatggctgag
aagtcggcacccagagcaccagctgctcaaagtggatttggctctggaggtggtaataga
ggcagaggcggttatggtgacaggaatcgggatagttatggtggggataggaaacgagat
agttatggtggggatagaaacagagatggtagagatggtcatggtggtgacacaggtggt
tatggtggtgggggccctgacaggcgtcatggtgggggacagcgctcacgtccatattga
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