Cryptomeria japonica (Japanese cedar): 131041272
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Entry
131041272 CDS
T10556
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131041272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131041272
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131041272
Membrane trafficking [BR:
cjf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
131041272
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131041272
Exosomal proteins of colorectal cancer cells
131041272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
131041272
NCBI-ProteinID:
XP_057830288
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Position
11:200249242..200293237
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AA seq
441 aa
AA seq
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MEGTIWANLLLSVQLTTSGRPVFQAGEVECSILDAVDLEIEDNQAYPVLKSGILMLTTIR
LIWMDENSRIAGSIPLPSIAQLFPPKKSLKNMFSKPRLRLLIWVSSDGRISSDSPSRAAR
SVGITLVLRGQVVPDAFVGRLWEILRSRAWEKDSNSVENVDKRVDGMVEGDGGSTKMRAS
MAGVSGILRKEQEQWEETDKSLHEAFQDLNALMSKAKDMVMLAEKMRTKLLAGSTGQSSA
GNDDEMGTKQEIQDWLLSVGIASPVTKETSGALYHQQLSRQLADFVKIPLERAGGMIALV
DVYCMFNRARGTELISPEDLLRACAIWERLNVSVILRRFESGVMVIQSKAQSDAEVFARI
TDLVVKPEAFQTGVGASEAARTLGVAPALAKEYLLTAESKGFLCRDDGPDGLRFYINFFK
EVDPSNMFIEKKFHLSNDRKL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggagggcacaatctgggccaatctgttactttcagtacaattaacaaccagcgggaga
cctgtattccaggcaggcgaggttgagtgttcaattctcgatgcagtcgatttggaaata
gaagacaatcaggcatacccagtgctaaagtcaggcatattaatgctaacaaccatcagg
ctcatatggatggacgaaaactccagaatcgcaggttcaattcccttgccttccattgcc
cagctattccctcccaagaaatcactcaaaaacatgttctcaaaaccccgactgaggctc
ctcatatgggtgtcatcggacggaagaatttcatctgacagtccgtccagggctgcaaga
tctgttgggataacattagttttgagggggcaagtggtccctgatgcattcgtggggagg
ttatgggaaattctgaggtctagggcatgggagaaagatagtaactcggtggaaaatgtg
gacaagcgggtggatggcatggttgagggtgatgggggctcaaccaaaatgagggcgtcc
atggctggagttagtggcattcttaggaaggagcaggagcagtgggaggagactgataag
agtttgcatgaggcatttcaagatttgaatgcacttatgagtaaagccaaagatatggtg
atgcttgctgaaaagatgcggacaaaactgttagcaggatcaactgggcagtccagtgca
ggtaatgatgatgagatgggaaccaaacaagagatacaagattggcttctcagtgtcggc
attgcatctccagttacaaaagagacttctggtgctctttaccatcagcagctgtcccgt
cagttggcagattttgtaaagataccactggaaagagccggaggcatgattgccctggtt
gatgtatattgtatgttcaatcgtgctcgagggacagagctcatttcaccagaagatttg
ctgcgagcttgtgccatttgggagaggctaaatgtatcagtaattcttagacggtttgaa
agtggagtaatggttatacaatctaaagcccagagtgatgctgaggtttttgcaagaata
acagaccttgttgtaaaacctgaagcttttcaaacaggagttggtgcaagtgaggcagca
agaaccttgggtgttgcgccggcacttgcaaaggaatatcttcttacggctgagagtaaa
ggtttcttatgtcgagatgatggtcccgatggccttaggttttatattaattttttcaag
gaagttgatccaagcaacatgttcatagaaaagaaattccacctttccaatgataggaaa
ctgtaa
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