Cryptomeria japonica (Japanese cedar): 131041288
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Entry
131041288 CDS
T10556
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjf03036
]
131041288
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131041288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
TRM13
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
131041288
NCBI-ProteinID:
XP_057830313
LinkDB
All DBs
Position
11:200440092..200498908
Genome browser
AA seq
770 aa
AA seq
DB search
MKRDFCDISDDEWGDTTVKLSRVMKRPARENNISNGNSQKKDNKALPPLESFAFKQKNNE
AAVGHQVSDHQLEDDDFQLGKSRSNGSRGRRFVVADESDEEFDQAAGNDNNVICLPVSED
GSDGVEGQCVEILDEEDVAEENIEVAEDDVVGNALQKCDQIAVTLREELSGSGSANINMC
YDRYAEVDATVTKIVTQGDIDAACNNRDSSFQPSLKPYQLVGVNFLLLLHRKKIGGAILA
DEMGLGKTVQAITFLTMLKYLDNDPGPHLIVSPASVLENWERELKKWCPSFSVLQFHGTG
RAALSKRLNHLSKSGGPPPFNVLLVCYTLFERHSEQQKDDRKVLKKWRWSCVVMDEAHVL
KDRSSYRRKNLMAVAQNAKQRLMLTGTPLQNDLEELWSLLEFMMPNIFETGDVDLKKILG
ASAEDRDLIARIKSILGPFILRRLKSDVMQQLVPKNHKVEFLTMVPEQADAYREAIEEYR
SASLARLAKSTGSDISNVVGFLPRRQISNYFMQFRKIANHPLLVRRLYTDSDVDSLARKL
HPRGAFGFECTLDRVRDELLGYNDFSLHQLSLSYGGVGARGTLDDRHALCSAKCQALAKL
LPVLHREGHRALIFSQWTSMLDILEWALDTISMTYSRLDGSTQVSERQTIVDTFNNDPTI
FACLLSTRAGGQGLNLIGADTVIIHDMDFNPQMDRQAEDRCHRIGQTKSVTVYRLVTKGT
VDENIYEIAKRKLVLDAAVLESGEEIANETDSDARTMGEILAAILASTSS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgatttttgtgatatttctgatgatgagtggggcgatacaacagtaaaactg
tccagagtaatgaagagacctgcacgcgagaacaatatcagcaatggtaattctcagaaa
aaggataacaaagcccttcctccacttgaatcttttgcatttaaacagaaaaacaatgaa
gcagctgttggacatcaagtatctgatcatcaattagaggatgacgattttcagttggga
aaaagtagatctaatggcagcagaggaaggcgatttgtcgttgctgatgaaagtgatgaa
gaatttgatcaagcagctggaaatgataataatgttatctgccttcctgttagtgaggat
ggatctgatggagttgaaggtcagtgtgtagaaattctcgatgaggaagatgttgcagag
gaaaacattgaagttgcagaagatgatgttgtagggaacgccctgcaaaagtgtgatcag
attgcagtcacattgcgcgaggagctttctggcagtggatcagcaaatatcaacatgtgc
tatgatagatatgcagaggtggatgccactgtgacaaaaattgtaacacagggggacatt
gatgctgcctgcaataacagggactcttcatttcaaccaagtttgaagccttatcagctt
gttggggttaattttctactcttgctgcatagaaagaagattggaggagctatattggct
gatgagatgggccttggcaagactgtacaggctataacattcttgacaatgctcaaatat
ttggacaacgatccaggtccccatttaattgtttctccagcttctgttttagagaattgg
gaaagagaacttaaaaaatggtgcccttcattttctgtccttcagtttcatggaactgga
cgggcagccttatcaaaaagactaaatcatctttcaaagtctggtggaccaccacctttc
aatgtgttactggtgtgctatacactttttgaaaggcacagtgagcaacagaaagatgat
cgcaaagtattgaagaagtggagatggagctgtgtggtaatggatgaagcacatgttctc
aaagacagaagcagctataggaggaaaaacttaatggctgttgctcagaatgcaaaacag
agactaatgcttacaggaacaccgcttcaaaatgatcttgaggagctttggtccctcttg
gagtttatgatgccaaatatttttgagactggtgatgtggacttgaagaagattttgggt
gcttcagcagaagacagagacttgattgctcgtatcaaatcaatattggggccatttatt
ttgaggcgcttgaaatcagatgttatgcagcagttggtaccaaagaatcataaggtagag
tttttgactatggttccagaacaagccgatgcatatagagaggctattgaagaatatcgt
tcagcttctttagcgcgtctggcaaaaagtacagggtcagacatatcaaatgttgttggt
ttccttcctcggcgtcagatttctaattattttatgcagtttcgtaagattgcaaatcat
cctttgctagtgaggcgtctctacacagattctgatgtagacagtttggctagaaagttg
catccaaggggtgcttttggatttgaatgcactctggacagagttagagatgaacttctc
ggttataatgatttttcattgcatcagttgtctctttcctatggtggtgttggagctcga
ggaacacttgatgacagacatgctttatgttctgcaaaatgtcaggcacttgcaaaactt
cttcctgtattacaccgtgagggtcatcgtgcgctgattttcagtcagtggacttcaatg
cttgatattctagagtgggcattggacacaattagcatgacctacagtcgattagatggg
agcacccaagtctcagagcggcagaccattgttgacactttcaacaatgatcctacaatt
tttgcatgtttactttccaccagagcaggaggccaaggtctgaacctaattggggcagac
acggtgataattcatgacatggatttcaatccccagatggatcgtcaggctgaagatcgt
tgccatcgtataggacaaacgaagtctgtgactgtctacaggcttgtgactaagggaacg
gttgatgagaacatctatgaaattgctaagcgtaagctggttttggatgcggcagttctt
gaatcaggagaggaaattgcaaatgagactgatagtgatgcacggaccatgggagagata
ttggctgctatccttgcatctacttcgagttaa
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