Cryptomeria japonica (Japanese cedar): 131041535
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Entry
131041535 CDS
T10556
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131041535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131041535
Membrane trafficking [BR:
cjf04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
131041535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF1157
Motif
Other DBs
NCBI-GeneID:
131041535
NCBI-ProteinID:
XP_057830647
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All DBs
Position
2:complement(566443796..566506931)
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AA seq
208 aa
AA seq
DB search
MKITALVVMKGKSNPNSGSASSSGSDPVLLSSASNLSQFGYFQRSSAKEFIMFVSRTIAS
RTLPGQRQSVQQEDYLVHCYNKNGLCGVAFMDNHYPVRSAFSVINKVLDEYQQNFGDSWK
AIQSDSNQSWPYLEEALTKFQDPGEADKLLKIQRDLDETKIILHKTIDSVLARGEKLDSL
VEKSSDLSMASQLFYKQAKKTNQCCTIL
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggcacttgtggtgatgaaaggaaaatctaaccctaattctggatccgct
tctagttctgggtctgatcctgtgttgctcagcagcgcttcaaatttaagccagtttggt
tattttcaacgcagcagcgccaaggaatttatcatgttcgtaagccgtaccatagccagt
agaactctcccgggacagcgtcaatccgtgcagcaagaagattacttggtgcattgttac
aataagaatggactatgtggggttgcattcatggataatcactatccagtacgcagtgct
ttctctgttatcaacaaggtattggatgagtaccagcagaattttggggattcatggaag
gccatacagtctgattcaaatcaatcttggccttacttggaagaagctctgaccaaattt
caggatccaggtgaagctgataaactcctgaagatccagagagacttggatgaaaccaaa
atcattcttcataaaaccatagacagtgtgcttgcaaggggggaaaaactggactcttta
gtggagaaaagttcagatctgagcatggcctcccagttattttacaagcaagcaaagaaa
accaaccaatgctgtacaatattgtaa
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