Cryptomeria japonica (Japanese cedar): 131041652
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Entry
131041652 CDS
T10556
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131041652
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131041652
PBAF complex
131041652
GBAF(ncBAF) complex
131041652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131041652
NCBI-ProteinID:
XP_057830794
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Position
4:693634428..693643249
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AA seq
554 aa
AA seq
DB search
MAANPSNNNSNPNPSLNPNPPVRIAGVIGAMGSGYPGGVLNPASGVSNPGPNPNSVNPLA
NSAAVHFQAQAQAHAHAQAQAQLQFQVQAQAQAQAQAQAQAQAQAQVATPPTVASMPGSI
NPKRGQQKPPARPTVGGTGMGSAGTGSVSASPFKTAEVTPATRRKKRKVPEKQIPDRVAA
LLPESAIYTQLLEFESRVDAALARKKVDIQEALKNPPSLQRTLRIYVFNTFANQNMQQQQ
NMGEPPSWTLRILGRILEDGVELDASGMPKQNSSSPKFSSFFRRITVSLDPSLYPENPNI
VWENVRSPMPVEGFEIKRKGDKEFTASIRLEMNYVPEKFKLSPPLIELLGIEVDTRPRII
AALWQYVKVKKLQHPSDPSVINCDPPLQKLFGGEKLKFSFISQKLSQHLSPPQPIHLEHR
IKLSGTSPAGNACYDVLVDVPIPVQKEMAAFLANTEKHRDIDACDEAICAAIKKIHEHRR
RRAFYLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKEGKSDFYNQPWVEDAVIRYL
NRKPASGSEAPGNT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaccccagcaacaacaacagtaatcctaaccctagtcttaaccctaacccg
ccggtgcgcatagcaggagtaataggagcaatgggctctggttaccccggcggagtactt
aatcccgcttcgggggtttctaacccggggccaaaccctaattctgtcaaccctcttgca
aactctgcggctgtgcatttccaagcacaggctcaggcgcacgcgcacgcgcaggctcag
gcacagttgcagtttcaggtacaagcgcaagcacaggcgcaggcacaagcacaagcacaa
gcacaggctcaggctcaagtcgcaactccaccaacggtagcatcgatgcctggttctata
aaccctaagcgagggcagcagaagccccccgcccgcccgactgtcggcggcactggcatg
ggctccgccggcacaggaagtgtttcggcgtcgcctttcaagacggcggaggtgacgcca
gccaccagacggaaaaagcggaaggtgccggaaaagcagatccccgatcgtgttgcggcg
ctgctaccagagtcagcgatttacactcagctgctcgagttcgaatcccgggtcgatgca
gcgctcgcgaggaaaaaggttgacatccaggaagcactcaaaaacccaccctctctccag
cggactctgagaatctatgttttcaatacctttgcaaatcagaatatgcagcagcaacaa
aatatgggggagcccccatcttggacactgcgaattcttggaagaatcctggaagatgga
gtggaactggatgcttcaggtatgccaaagcagaactcatcgtccccaaaattttcttca
tttttccggcgaatcactgtttccttggacccaagtttgtaccccgaaaatcctaacatt
gtttgggagaatgtccgatcccctatgcctgtggagggctttgagataaaacggaagggt
gacaaggaatttacggcttctatacggctggaaatgaattatgttccagagaagtttaag
ttatctcctcctttaatagagcttttgggaattgaagtggacacaagaccaagaattata
gctgcactttggcagtatgtaaaggttaagaagcttcaacatccttctgatccatctgtc
atcaattgtgatcccccattgcagaaactttttggtggcgagaagcttaaattttctttt
atttcacagaaactctcacagcatctgtctcctccacagccaattcatttggaacataga
attaaactctcagggactagtcctgctggcaatgcttgctatgatgttttggtggatgtt
cctattccagtgcagaaagaaatggcagcttttttagctaatactgagaaacatagggac
attgatgcctgtgacgaggcaatctgtgcagcaattaaaaaaattcatgagcatcgccgc
aggagagcattttacctgggtttcagccagtctcctgtggaattcataaatgccttgata
gcatcacaaagcagggatttgaagctagttgcaggtgaagcaagccggaatgctgagaag
gagggcaaatcagacttctacaatcaaccatgggtggaagatgctgtcattcgttacctc
aaccgcaagccagcatcggggagtgaagctcctggaaatacttga
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