Cryptomeria japonica (Japanese cedar): 131041698
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Entry
131041698 CDS
T10556
Name
(RefSeq) cryptochrome-1
KO
K12118
cryptochrome 1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
131041698
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
131041698
NCBI-ProteinID:
XP_057830858
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Position
11
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AA seq
696 aa
AA seq
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MGCSIVWFRRDLRLEDNPALVAAARGGGSVVPVYIWCPNEEAQFHPGRVSRWWLKMSLMH
LDQSLRALGVPLLILRTTDTLSALLNLIQSTGATQLFYNRLYDPISLVRDHKLKQQLIEK
GYFVFNFNGDLLYESWQVYDENGNAFTRFNAFWEKCLNMPFDPEAPLLPPRKLVPSTGVL
SSCTIEELGLETETEKTSNALLERAWSPGWSHADKALDRFLAGPLLEYAKQRKKVDGRNT
SFLSPHIHFGELSVRKVFHLVRRKQTIWLRERKALAEESVNLFLRSIGLREYSRYLCFNF
PFTHERPLLGNLRFFPWRPDEGLFKAWRQGRTGYPFVDAGMRQLWATGWLHNTVRVIVSS
FYVKFLQLPWTWGMKYFWDTLLDADIECDILGWQYVSGSLPDGHELDRIENPQAEGCKYD
PDGEYVRQWLPELTRMPTEWIHHPWNAPIAVLNAAGVELGINYPRPIVEKASAQERLQQA
LSVMWERDATARREEGLGDTLEIQGTGGPLHEKMVVPKVVVMNKSDPSVNPWSDQQVPCI
STASSVPEAPCVKNNFTSNLQISPSESEKVPTVATEANFDSLKKCEEQNQLLRIRPVSVE
SDEHSTAVSSSVRKSTDLESKPSAIPLWSQVADTDLETASEQAGLQSSVELFGQKRTLQL
FNCTIPMVANKIEDEAESSVKYGWTRPTKRQARIDN
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtagtatagtgtggttcaggagggacctgagattggaagacaatccagcattg
gtagcagctgcaagaggtggtgggagtgtagtaccagtgtacatatggtgtcctaatgag
gaagcccaattccatccaggtagagtttctcggtggtggttaaagatgagcctcatgcat
ttggatcagtctctgagagccctaggtgttcctctgctcatccttagaactactgacacc
ctttctgctctgcttaacttgattcaatccactggtgccactcaactcttctataatcgt
ctatatgatcctatatcgcttgtacgtgatcataagctgaaacagcaacttatcgaaaaa
ggttattttgtgttcaactttaatggtgatttattatatgaatcatggcaagtttatgat
gagaatgggaatgctttcacaagatttaatgctttttgggaaaagtgcttgaacatgcca
tttgatccagaggcaccacttcttcctccaaggaaactggtaccgtcaacaggtgtattg
tcttcatgcacgatagaagaactaggtctggaaactgaaacagaaaaaactagcaatgca
ctgctggaaagagcatggtctccaggatggagccatgcagataaggcattagacaggttt
cttgcagggcctctcctagagtatgcaaaacaaagaaaaaaggtcgatggtcgcaatact
tcattcctctcacctcacatacattttggagagttgagtgtaaggaaagtgtttcacttg
gttcgaaggaagcaaactatttggttaagagaaaggaaggcacttgctgaagagagtgtg
aatttgtttcttagatcaattggtctgagggagtactcaaggtatctttgcttcaatttt
cctttcacgcatgaacgaccactactaggaaatttaagattttttccttggagaccggat
gaaggtttattcaaggcatggagacaaggacgtacaggctatccattcgtagatgccgga
atgagacaattgtgggcaacaggatggttgcataacacagtaagggtgattgtttctagt
ttttatgtgaaatttcttcagcttccctggacatggggaatgaagtacttttgggacacg
ctgttggatgcagatatagagtgtgatattcttggttggcagtatgtctctggtagtttg
cccgatggccatgagctggatagaattgaaaaccctcaggctgagggttgcaaatatgat
cctgatggagaatatgtccggcaatggttacctgaactgacaagaatgccaaccgagtgg
atacatcatccgtggaatgctccaatagcagtactcaacgctgccggggttgagttgggt
ataaattatccaagaccaattgtagagaaggcttctgctcaagaacgtttgcagcaggca
ctttcagtaatgtgggaacgagatgcaactgcaagaagagaagaagggttaggtgatacg
ctagaaattcaaggcacgggaggtccattacatgaaaaaatggttgttcccaaggtagtt
gtgatgaataaatctgacccatcagttaacccatggagtgatcaacaggttccttgtatt
tccactgcttccagcgtaccagaagccccttgtgtgaaaaataacttcacaagcaatcta
caaatatctccaagtgagtcagagaaggtccctacagtagccacagaagctaattttgat
agcttaaaaaaatgtgaggagcagaatcagttactgaggataagacctgtatctgtagag
agtgatgaacattctacagcggtgtcttcatctgtcagaaaatctacagatttggaaagt
aaaccaagtgctatcccactgtggtcacaggtagcagatactgacctagaaacggcatca
gaacaagctggcctacaatcatcagttgaattgtttggacaaaaacgtaccctacaattg
ttcaactgtaccatacccatggttgccaacaagattgaagatgaggccgaaagctcagtt
aaatatggttggacaagaccaacaaagagacaagccagaattgacaattga
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