Cryptomeria japonica (Japanese cedar): 131042295
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Entry
131042295 CDS
T10556
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131042295
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131042295
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131042295
NCBI-ProteinID:
XP_057831620
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All DBs
Position
3:746677014..746678472
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AA seq
368 aa
AA seq
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MLRRSLNSSRRNLISCGTGNPIDDCWRCDSDWVNNRKRLADCAIGFGKNAIGGKQGRFYV
VTDPNDYDPVNPRHGTLRHAVIQTEPLWISFQKDMVIKLKQELIMNSYKTIDGRGANVHI
ANGACITIQYVTNIIIHGVHIHDCIPAGNTNVRSSPTHYGYRTRSDGDGISIFGGSAIWV
DHCSLSSCTDGLIDAIRGSTAITISNSFFTHHDKVMLLGHSDDYTQDVNMQVTVAFNHFG
EGLVQRMPRCRHGYFHVLNNDYTHWEMYAIGGSANPTINSQGNRFLAPANPSSKEVTKRE
IAVEGTWRNWNWRSVGDLMLNGAFFRASGAGASSSYAKASSTAARPSSVVGSITATAGVL
TCTKGSRC
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcaggagtttaaatagttccagaaggaatctgatctcgtgcggaacggggaac
ccaattgacgactgttggcgttgtgattccgattgggttaataacagaaagaggctggct
gactgtgccattggatttggcaaaaacgccattggaggtaagcagggcagattttatgtg
gtcacagatcccaatgattatgacccagtcaatccccgccacggcactctgcgccacgct
gtcattcaaactgagcctctctggattagtttccaaaaagacatggttattaagctcaag
caggagcttatcatgaacagctataagactattgatggtagaggagcaaacgttcatata
gcaaatggagcttgcattacaatacagtatgtgaccaatattatcattcatggagtacat
attcatgactgtataccagcaggaaatacaaatgtgaggagctcacccacccattatggt
tatagaactaggagtgatggagatgggatttccatctttggaggaagtgcaatttgggta
gaccactgttcattgtcaagctgtacagatggactgattgatgccatcagagggtccact
gctattaccatttcaaacagctttttcactcaccatgacaaggtgatgcttcttggacac
agcgacgactatacccaagacgttaacatgcaagtaacagttgcattcaaccatttcgga
gaagggcttgttcagcgtatgcccaggtgccgacatggatacttccatgtgctgaacaat
gattacactcactgggaaatgtacgccattggtgggagcgcgaatcccaccattaacagc
caaggcaacagattccttgcccccgcaaatccatccagcaaggaggtgacaaagcgtgaa
attgcagtagaaggtacatggaggaattggaattggagatcagtgggagatctgatgtta
aatggggcattcttcagagcatcaggggctggagcatcctcaagctacgccaaagcttcg
agtactgctgcaaggccttcctctgtagtgggctctatcactgcaactgcaggcgttcta
acctgcacaaaaggctcccgctgttag
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