Cryptomeria japonica (Japanese cedar): 131042392
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Entry
131042392 CDS
T10556
Name
(RefSeq) eukaryotic initiation factor 4A-6 isoform X1
KO
K03257
translation initiation factor 4A
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131042392
03012 Translation factors [BR:
cjf03012
]
131042392
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131042392
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131042392
mRNA cycle factors
Stress granule specific factors
131042392
Translation factors [BR:
cjf03012
]
Eukaryotic type
Initiation factors
eIF-4
131042392
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131042392
Exosomal proteins of bladder cancer cells
131042392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
131042392
NCBI-ProteinID:
XP_057831671
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All DBs
Position
5:812431987..812435651
Genome browser
AA seq
411 aa
AA seq
DB search
MAGMDQAGGNFDAKNYDKNMQNVLGGEELYSTWEEVHDTFDSMGLQENLLRGIYAYGFEK
PSAIQQRGIVPFCQGLDVIQQAQSGTGKTATFCSGILQQLDYNLQDCQALVLAPTRELAQ
QIEKVMRALGDYLQVKVHACVGGTSIREDLRILQSGVHVVVGTPGRVYDMLRRRALRSDY
IKMFVLDEADEMLSRGFKDQIYDIFQLLPQNLQVGVFSATMPPEALEITRKFMNNPVRIL
VKRDELTLEGIKQFYVNVDKEEYKLDTLCDLYETLAITQSVIFINTRRKVDWLTDQMRAR
DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN
YLHRIGRSGRFGRKGVAINFVTRDDERMLQDIQRFYNVVVEELPSNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatggatcaagccgggggtaattttgatgcaaagaactatgacaaaaacatg
cagaatgtccttggaggcgaggaactttattctacttgggaagaagttcatgatactttt
gactctatgggtcttcaagaaaatttgttgcgaggaatttatgcttatggttttgagaaa
ccatctgctattcagcagagaggtattgttcctttttgccaaggccttgatgttatccaa
caagcacaatcaggaacaggaaagactgcaacattttgttcaggaattctacaacagctg
gactacaatctccaggattgccaggcactagttttggcaccaactcgggaactggcacaa
caaatagaaaaagttatgagggcacttggtgattatctacaagtaaaagtgcatgcttgt
gttggaggaacaagcatccgggaggacctccgtattctccaatctggtgttcatgttgtt
gtggggacacctggcagggtttatgacatgctccgtcgccgtgccctgcgctctgattat
attaaaatgtttgttcttgatgaagcagatgaaatgttgtcacgtggattcaaagatcag
atatatgatattttccagttgcttcctcaaaacctccaagttggtgttttctctgctaca
atgcctcccgaagccctggagattacaaggaagttcatgaataatccagtccggattctt
gtgaagagagatgaacttactctagagggtattaaacagttctatgtcaatgtggacaaa
gaggaatataagcttgacacattgtgtgatttgtatgaaacactagcaataacacagagt
gtgatttttatcaataccaggagaaaggttgattggctcacagaccaaatgagagctcgt
gatcacacagtgtcggcaacgcatggtgatatggatcagaatactagagacatcattatg
agagaatttagatctggttcttccagagtgctgattacaactgaccttttggcccgaggt
attgatgtgcaacaagtttctcttgtcatcaattatgacttgccaacacaaccagaaaac
tatctccaccgtataggtcgtagtggaagatttggtaggaagggtgtggcaataaacttt
gtcacccgggacgatgagagaatgcttcaggatatacaaagattctacaatgtggtagtt
gaagaactgccatcaaatgttgcagatttgatataa
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