Cryptomeria japonica (Japanese cedar): 131042646
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Entry
131042646 CDS
T10556
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03013
Nucleocytoplasmic transport
cjf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131042646
03015 mRNA surveillance pathway
131042646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131042646
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131042646
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131042646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
131042646
NCBI-ProteinID:
XP_057831947
LinkDB
All DBs
Position
3:587384501..587425401
Genome browser
AA seq
512 aa
AA seq
DB search
MAEDGKEKIMMNREETLTEQKKDSTENENSNKYKSVETKVVEKKRWGDEELDDDKVSGAV
DVIKSININEAATVDEPEIILKSDKLIEPADSDDSHIKAVTAGDTPYTSAKTFEDLNLSS
ELLRGLYSEMGFEKPSKIQAVTLPMIIRPPHQNLIAQAHNGSGKTTCFVLGMLSRVNPNI
NAPQALCVCPTRELAIQNQEVLLKMAKHTSITSACAVPTDAASYVKRRDPFTEHVVIGTP
GTLKKWMTAKVLSMRYISILVFDEADHMLAQDGFRDDSMRIIKDIQKNRGDLQILLFSAT
FDENVKQFATRVISNPNQVFVKKEELSLDVIKQYRVKCPDKLAKVQVLKDRIFPLAEKLG
QSIIFVRTRESASMLHSKLEAEGYKCTSIQGGLKLEDRDLVIKEFRMGLTKILIATDVLA
RGFDQAQVTLVVNFDLPTKHTPPHDPDYEVYLHRIGRSGRFGRKGAAFNFLTDERDEQTM
SKIERHFQREVPEVPWDDEEAFETVLKDAGLA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatgggaaggaaaagataatgatgaatagagaagaaactttgacggagcag
aaaaaggattcaacagaaaatgaaaatagtaataaatacaagtctgtagagactaaggtt
gtagagaaaaagaggtggggggatgaagaattggatgatgataaggtttctggtgcagta
gatgtaataaaatctataaatatcaatgaggcagctactgtagatgaacccgaaatcatt
ctgaaaagtgataaacttattgagccagctgactcagatgattcacatatcaaagcggtt
actgctggagacactccttatacttcagcaaaaacatttgaggatttgaacctttcatct
gaactactcaggggtctctattcagagatgggatttgagaagccaagcaaaatccaagca
gtaactcttccaatgattattagaccacctcaccaaaatttgattgctcaggctcacaat
gggtctggaaagactacttgttttgttctgggtatgttgagcagagttaatccgaacatt
aatgcaccacaggcactttgtgtatgcccaacaagagagttggcaattcagaatcaagaa
gttctcttaaaaatggcaaagcatacatctataacgtcagcatgtgctgtacctactgat
gctgcaagctatgtcaaaaggcgcgacccttttactgaacatgttgtaattggcactcct
ggtacacttaaaaagtggatgacggcaaaagttttgagcatgagatacatcagtatactt
gtttttgatgaagcagatcatatgctggctcaggatggatttagagatgattcaatgaga
atcataaaggacattcagaaaaatcgaggagatcttcagatccttcttttttcagcaact
ttcgatgaaaatgtgaagcaatttgcaacaagagtgatttcaaatccgaatcaggtgttt
gtgaagaaagaagagttgtctttagatgtcatcaaacagtatcgtgtgaaatgcccagat
aaacttgctaaagttcaagtattgaaggatagaatttttccgcttgctgaaaagcttggg
cagtcaataatttttgttcgcacaagagaaagtgcaagcatgttgcatagtaaattagaa
gcagagggttacaagtgtacttctatccaaggaggtcttaagctggaggacagggatctt
gtaattaaggaattcagaatgggactgacaaagatccttattgcaactgatgtgctagca
cggggttttgatcaagcgcaggtaaccttggttgtcaattttgatctccctaccaaacat
actcctccacatgaccctgattatgaagtatatttgcaccgtattggacggagtgggcgt
tttggtcgcaagggagctgcttttaatttcctcactgatgaaagagatgagcaaacaatg
agcaagattgagaggcatttccagcgagaggtgcctgaggtgccttgggatgatgaggaa
gcttttgaaactgttttgaaagatgcagggcttgcatag
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