Cryptomeria japonica (Japanese cedar): 131043006
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Entry
131043006 CDS
T10556
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131043006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131043006
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131043006
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131043006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-Di19
zf-RING_6
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
131043006
NCBI-ProteinID:
XP_057832339
LinkDB
All DBs
Position
6:complement(425863685..425883658)
Genome browser
AA seq
321 aa
AA seq
DB search
MSCLRVMKEQRGDEAPYAEAGTAFMDDKGSVFSDIESPSGTIIEQPSIKKAHSLNNGKPA
ISPTSGVHELLECPVCTNSMYPPIHQCPNGHTLCSNCKSRVNNKCPTCRQELGNIRCLAL
EKVASSLDLPCKYHTLGCPDIFPYYNKLKHEAQCTFRPYNCPYAGSECSITGDIQTLVAH
LRDDHKVDMHNGSTFNHRYVKLNPLEVENATWMLTVFNCYSSYFCLHFEAFQLGAAPVYM
AFLRFMGDDNEARNFRYSLEVGANGRKLIWQGVPRSIRDSHRKVRDSHDGLIIQRNMALF
FSGGDWKELKLRVTGRIWKEQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtctaagggttatgaaggaacaaagaggggatgaagctccttacgcagaagca
ggcactgcctttatggatgataaaggatcagtgttttcagatattgaatctccttcaggc
accataattgaacaaccttctattaaaaaggctcattctttaaataatggaaagcctgct
atatctccaacttccggtgtacatgaacttctagagtgtcccgtctgcacaaattctatg
tatccaccaattcatcagtgtcctaatgggcataccctctgctccaactgtaagtcaaga
gtaaataacaaatgccctacttgcagacaggagcttggaaatataagatgcctagcattg
gaaaaggttgcatcatctcttgacctaccatgcaagtatcatactctgggctgtccagat
attttcccatattataataagcttaaacatgaggcacaatgtacatttcggccatacaat
tgcccttatgcaggatcagaatgttctatcacaggggatatacagacacttgtggcgcat
ctaagggatgatcacaaagttgatatgcacaatggtagcactttcaaccaccgttatgta
aaactcaatcctcttgaagttgaaaatgcaacctggatgttgacagtcttcaattgctat
tcatcatacttctgtcttcattttgaagcatttcagttaggtgcagcaccagtgtatatg
gcattccttcggtttatgggagatgataatgaagctagaaatttcagatatagtctcgag
gttggagcaaatggccggaaactaatatggcaaggagtgcctaggagtattcgggacagt
catcgtaaagttcgggacagccatgatgggttaattattcaaaggaacatggcactgttc
ttttctgggggtgattggaaagagttgaagttgagagttaccggacggatctggaaggaa
cagtaa
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