Cryptomeria japonica (Japanese cedar): 131043015
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Entry
131043015 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131043015
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131043015
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131043015
MMR (mismatch excision repair)
131043015
DSBR (double strand breaks repair)
HR (homologous recombination)
131043015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131043015
NCBI-ProteinID:
XP_059078056
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Position
6:complement(424791580..424793782)
Genome browser
AA seq
522 aa
AA seq
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MASSTATSESIDYSTIDNLAKTQEYVPTPFAIKSINVGDDLPSTLLQVLSFQKMQNNTDD
TDRHKLVLSDGTYMQLAILPSKFIVILSLEVKQSDCPFFGKPVYMFKEQQPEMMFEDRPS
TSKRSLQFATELPSPQTTTSENISPIKSSHYLISKGSIKEANARYNKLNSHLEITLSNAS
ILKHCTNEEQADQQGPPFTPINKLFHLTNNMLVDIIGLVLYVGDIIPIHKKDGNQTHKHV
VKISDISNSTIDINLWGLMAKQKGLELKNMLSNDSVVIFSLRNARVGYFNGKLINITAAT
TLHINPTFLEAELLTLRGKDPLLVVPFVAETIHIDGKYSRMTIYSIHEWMSIKLETIQTN
LLAILRFVNVTDQNFYYAACPLIVNGRPCKKKCTQQVDDSWFFSRCQMTMQDYNYSYLLP
LKLQDATGTLWATVVDEGSIHLLQKTVKQLCALQNDATTTKTSCSVIKRLLSCHYSFTLL
VSTETYNSESKMKVTVNKVAPVDFKAKCHALLPEIGRLSTQT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcaacagccacctctgaatcgatagactactccactattgataatttggca
aaaacccaagagtatgtccctaccccttttgcaattaaatctatcaatgttggggatgac
cttccttcaacattgttacaagttttgtcatttcagaaaatgcagaacaacacagatgat
actgacagacataaattagtgttatctgatggcacatacatgcagttggcaatcttgccc
tctaagtttattgtaatacttagtttggaagtgaaacaaagtgattgcccgttctttggt
aaaccagtatacatgttcaaagaacaacaaccagaaatgatgtttgaggacagaccatca
acatctaaacgatctcttcaatttgccactgaattgccatccccacaaacaacaacttct
gaaaatataagccctatcaaaagttcacattatcttatttcaaagggatctattaaggag
gcaaatgcaaggtacaacaaactaaatagtcatttagaaatcaccttgtctaatgcatcc
atactaaaacattgcaccaatgaagaacaagcagatcaacaaggtcctcctttcacgccc
attaataaattgtttcatctaacaaataacatgttggttgacataattggccttgttcta
tatgttggagatatcattccaatacacaagaaagatggcaatcaaacacacaaacatgtt
gtgaaaattagtgatatatctaattcaacaattgacatcaacctatggggtctaatggca
aaacaaaaaggactagaattgaaaaatatgttgagcaatgatagtgtggttatcttttct
ttacgtaatgctcgtgttggctatttcaatgggaagcttataaacataacagctgcaacc
acattacatatcaacccaacttttctagaagcagagcttctaacattaagaggaaaggac
cctttgcttgttgtaccctttgttgcagaaactatccacatagatggtaaatatagtaga
atgactatttattcaatccatgagtggatgagcatcaaactagaaacaattcagacaaat
ttgctagccattctgcgctttgtaaacgtaactgaccaaaatttctattacgcagcctgt
ccactaatagtcaatggaaggccttgcaagaaaaaatgtacacaacaagttgatgattct
tggtttttctctagatgtcaaatgactatgcaagactataattatagttacctcttgcca
ctaaagttacaagatgccacaggtactctatgggccactgttgttgatgagggtagcatt
cacttgctacagaaaactgtaaaacaactttgtgcactacaaaatgatgcaacaacaaca
aagacatcttgctcagtgattaagagactactgtcatgtcactattcattcacactgttg
gtttccactgagacatataattcagagtcaaagatgaaagtgacagtcaataaagtcgct
cccgttgacttcaaagctaagtgtcatgcactacttccagaaattggccgcctaagtaca
cagacttag
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