Cryptomeria japonica (Japanese cedar): 131043096
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Entry
131043096 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131043096
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjf01002
]
131043096
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131043096
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131043096
Peptidases and inhibitors [BR:
cjf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131043096
Ubiquitin system [BR:
cjf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131043096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
zf-HIT
SEC-C
Motif
Other DBs
NCBI-GeneID:
131043096
NCBI-ProteinID:
XP_057832424
LinkDB
All DBs
Position
5:772296736..772360981
Genome browser
AA seq
1355 aa
AA seq
DB search
MHDAGGYVDVSTLLPLFITFVLVSVSLAFLKNTAAKYLANPNLRFDPEPVQIQQTEKKVE
FTSMLDQHNVCAVCGEPGPKRCSRCKAVHYCSSECQTKHWTQGHKLDCRSGMTPTQGALK
NSSISSNAFETSKKNPISLKVSSAGISLASSDGTSDGILPKPKKVLFPYKMFVEFFNWDK
QRLTPCGLVNCGNSCFANVVLQCLTCTRPLVAYLLEGTHMLTCTRNDWCFLCELHQHIRR
VSQSEEPFSPFGILCHIPKMGGNLGCGKQEDAHEFMRVAIDSMQSICLDEFGGEKAVDLD
SRLTTLICHIFGGYLQSQVICTQCHQVSNRYEHMLDLNVEIHGDVASLEDALDQFTGHEW
LDGDNKYYCDGCNTYVRAQKQLSILQAPNILTIALKRFQTGRFGKLNKRVTFPETLDLSP
YVSGKEESSHIYKLYAVVVHVDMLNASFFGHYICYVKDLHGLWYRTDDAKVKRVELEEVL
SQRAYMLLYSRICVRSSSAADIPKSTAPNMAKVDCSYSASLVHRQSHITQSRTDGYLSSP
FEVVEPLRSNLGVVQEGISENVGALDSLLSSDELRGRQKSNAVDCDADVSVDLASEESGS
LTNNSSCSEDLSIKAGQEELDKVLPSLPELNPPNMCLPGTSSYPLFLEAKNFDASSPSSI
GNVEHNVSVDHVNERSMSVDPLASMEFFPQKNYDDEIFSSSVSKQLHDTPVTNDLIEDEV
NRTTAVQSSNSDLQLSDKMSCDDEVEQPSVGNSSDSFLALLKESSVMEDIVDSSVQQIPI
EMNKTLFSHSNSVALPNLSLDVWSNSMVGGNQHTTLFDNGDFCGPPVRNNNAYEADLMED
QKDFEHKILMQEGPATEKKRHDFHPDVACSATQPSERETLLFNKEHEIVPVIVSQMNSTP
TKENGVSIESSNQTNKFPKENGMAERIQDSSSKQELHEYNYIPDYNGKSHTNQNTYLKNT
QAAMLEGSGTSPEFSPIPVHGAEVITSCVNNGASSTPVRKTVKSKPIFAPGFLKRPPTLS
VSSSGTGSSLKDLNNDVVGSKLISSNGKDSISLSQICLSPNDSSNNVVAAKLMTSNGKVS
NSSSISYSSPKDLSTNVFSAETITQNDKDSVLTSGTCSSHTDRSDNVFGAKLMTSNSFQC
DIDSQVQINVSSNEISSIPVDESKMASPIWSDFDTDTREEVIVPHPCQASGAERLNNMKT
KSLFTPGFLNRASKSQIVSQSKLSQMDCSEVVQSVVRANESGPFDTNSCTPMPSQSGTDV
RPVDVVAEYDENVGHDQSGSSASSEKELIGSGRKRTLSSESLHTEQGSSITMNSIGKTSL
IRQKQGRNDCCSCGSQRKWKKCCGRPDALRPIAGR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcgggtggttatgtggatgtctccacattgttaccgctctttataactttt
gtgctcgtttcagtgagtctggcatttctcaagaataccgcagccaaatatttagcaaac
cctaatcttagatttgatcctgaaccagttcaaattcagcagacggagaagaaggtggaa
ttcacctcaatgttggaccagcacaatgtctgtgctgtttgcggcgagcccggacccaag
cgttgctctcgatgcaaagctgtgcactactgctcgtcggaatgccaaaccaaacattgg
actcaaggtcacaaactagactgtcggtcaggcatgactcccactcaaggggctttaaag
aattccagcatttcttctaatgcatttgaaacttccaagaagaatcctatttcgctgaag
gtttctagtgctggaatatcattggcctcttctgatggaacttctgatggcatattaccc
aaacctaagaaggtgttgtttccatacaaaatgtttgtggagtttttcaactgggacaaa
caaaggttgacaccatgtgggctggttaattgtgggaacagttgctttgcaaatgttgtg
ctccagtgtctcacatgtacaagacctcttgtagcatatttgcttgagggaacacatatg
ctaacatgtacaagaaatgattggtgctttttatgtgagcttcatcagcatatacggagg
gttagccaaagtgaagaaccattttcaccttttggaatactctgtcatataccaaaaatg
gggggaaatctcggctgtggaaagcaagaagatgctcatgaatttatgagggttgcaatt
gactcaatgcaatctatctgtcttgatgaatttggaggagagaaggcagtagatcttgat
agtagattgaccactcttatatgtcatatatttgggggatatctccagtctcaggtgata
tgtacacaatgccaccaagtgtcaaatcgatatgagcatatgttggatctaaatgttgaa
attcatggtgatgtggcatctttggaagatgctcttgatcaatttacaggacatgaatgg
ctggatggagataataaatattattgtgatggatgcaatacgtatgtaagggcacagaaa
caacttagtattcttcaggccccaaacattcttacaattgcacttaaacgatttcagact
ggaaggtttggaaagttgaataagagagtaacatttccggaaaccttagatttatcccct
tatgtaagtggaaaggaggaaagttcgcacatctacaagctctatgctgttgttgtacac
gtggatatgctaaatgcctctttttttgggcactatatctgttatgtcaaggatttgcat
gggttgtggtatagaacagatgatgccaaagttaaaagagttgaactggaggaagtattg
tctcaaagagcttacatgctactatacagcaggatatgtgttcgtagctcttcagctgca
gatataccaaaatcaacagcaccaaatatggcaaaagtcgattgtagctattctgcttct
cttgttcacaggcaatcacatattacacaatcaaggactgatggatatctctctagtccc
tttgaagtagtggagcctctcagaagcaatctaggtgttgtgcaagaaggcattagtgaa
aatgttggtgctttggacagccttttaagtagtgatgagctcagaggtagacagaagtcc
aatgcagttgattgtgatgcagatgtgtctgtagatttagcatctgaagaatcaggatcg
ctgactaataattctagttgttcagaggatttgtccataaaagctgggcaagaggagctg
gataaggtgcttccttcactgcctgaacttaacccacccaatatgtgcctacccggtact
tcttcttaccccctgtttttggaagctaagaattttgatgcatcctctccatcttcaatt
ggaaatgtggaacacaatgtatctgtggatcatgtaaatgaaagatccatgtctgttgac
cccttggccagtatggaattctttcctcaaaaaaactatgatgatgaaatatttagtagt
tcagtctcaaagcagttgcatgatacacctgtgacaaatgatttgattgaagatgaggtg
aatagaactacagctgtccagagttctaattctgatttacagttatcagataagatgtcc
tgtgacgatgaagtagaacaaccctctgttggaaactcttctgacagttttcttgctctt
ttgaaggaatcttctgtcatggaagacattgtggattcttcagtgcaacagatccctata
gagatgaataaaacattattttcacacagcaacagcgtggctttaccaaacctatcattg
gatgtatggtccaattctatggttggtggaaatcaacatacaactctctttgacaatggg
gatttctgtggtccacctgtaaggaataacaatgcttatgaagctgatctgatggaggat
caaaaagattttgagcataagatccttatgcaggaggggccagcaactgaaaaaaagagg
catgattttcatcctgatgttgcatgctctgctacacaaccatcagagagagaaacattg
ttgtttaacaaggagcatgaaatagttcctgtcattgtttcacagatgaattcaacacca
acaaaagagaatggtgtatctattgagtcatccaatcagaccaacaaatttcccaaggag
aatggtatggcagaaagaattcaagattctagttcaaaacaagaattacatgaatataat
tacatacctgattataatgggaaaagtcatactaatcagaacacctacctgaagaatacg
caggctgctatgttggaaggttctggtacctctcctgagttttctcctattccagtacat
ggtgccgaggtaatcacttcctgtgtcaataatggagcgtctagcacaccagtgagaaaa
acagtaaagtcgaagcctatatttgctccaggcttccttaaaaggcctccaactctttca
gtttcatcaagtggaacaggctcatcacttaaagacctaaataatgatgttgttggttcc
aagttaataagctcaaatggaaaggattcaatttcattaagtcaaatttgtctatcacct
aatgactcgtctaataatgttgtcgctgccaagttaatgacctcaaatggaaaagtttca
aattcatcaagtatatcttattcatcacccaaagacttgtcaactaatgttttttctgcg
gagacaataacccaaaatgataaagattctgttttaacaagtggaacatgttcatcacat
acagacagatctgataatgtttttggtgccaaattgatgacctcaaattctttccagtgt
gatatagattctcaagttcagataaatgtttcctcaaatgaaatttcttctatcccagta
gatgagtccaaaatggcgagtccaatttggtcagacttcgacacagatactagagaggag
gtaatagttccacatccatgccaggcatctggagcagaaagactaaataatatgaaaaca
aagtccctatttacacctggcttcttaaacagagcatctaagtctcaaattgtaagtcag
tctaagctatcacaaatggattgcagtgaagtagttcagagtgtggtgagagcgaatgaa
tctgggccatttgacacaaatagctgtacgccaatgccaagtcagtcaggaacagatgtg
aggccagttgatgtggtagcagaatatgatgagaatgtagggcatgatcagtcagggagc
tctgcttccagtgaaaaagaactaataggtagtggcagaaagaggactttgagctcagaa
tctttgcacactgaacaaggaagttctataaccatgaattccatcggaaagacaagtctt
ataaggcagaaacaagggcgcaatgattgttgttcttgtgggtcacaacggaagtggaag
aaatgttgtgggcggcctgatgcacttagaccaatagcagggaggtga
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