Cryptomeria japonica (Japanese cedar): 131043546
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Entry
131043546 CDS
T10556
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131043546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131043546
04121 Ubiquitin system [BR:
cjf04121
]
131043546
03029 Mitochondrial biogenesis [BR:
cjf03029
]
131043546
Membrane trafficking [BR:
cjf04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
131043546
Ubiquitin system [BR:
cjf04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
131043546
Mitochondrial biogenesis [BR:
cjf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131043546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
131043546
NCBI-ProteinID:
XP_057832742
LinkDB
All DBs
Position
2:571026012..571075269
Genome browser
AA seq
276 aa
AA seq
DB search
MANDSMWDGTLSPEDFQVASMNLIEKWAMCESTFQPWRWEPCPKLPWGVSHSENGYLSLG
DILINYLNSQHNVAEGEYELEQGEETLDPATLVNSHHCESHLYTFHIVYNHSYKVPMLLF
HGHSIDGRPLELEEIKKDLPSHSCQLLEDSKWTFLTQEEHPYLNRPWYALHPCGTSKWMG
FLFSSRTSSNVKPTTIVEQDLTQSESCLLKEDNGQNSPTMEEIISGGNNFSKSNIESTTC
NTSRTEIISQYLIAWLSVVGQVVGLRVPFEIVKLPS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgatagcatgtgggatggcactctcagtccagaagatttccaggttgcatca
atgaatttaatagaaaaatgggcaatgtgtgagtccacatttcaaccatggagatgggag
ccttgtccaaagttaccctggggagtatctcatagtgaaaatggctatttgtcgcttgga
gatatccttataaactacctaaattcgcagcataatgtagctgaaggtgagtacgaactc
gagcagggagaagaaaccttagatcctgccacactggtcaatagtcatcactgtgaatcc
catctctacacctttcatattgtctacaaccattcttataaagttcccatgcttcttttt
catggtcacagtattgatgggagaccgctcgagttggaagagattaagaaggatcttcca
tcacattcttgtcaactacttgaggattcaaaatggacatttcttacacaagaggagcat
ccctatttaaaccgaccatggtatgcacttcacccttgtggaactagcaagtggatgggc
tttcttttctcaagcagaacatcctcaaatgtcaaaccaactacaatagttgaacaggat
ctaacacaaagcgagagttgtttgttgaaagaagacaatggacagaactcccctaccatg
gaagaaatcatcagtggtggcaacaattttagcaaaagtaacattgagtcaaccacatgt
aatacctcaaggacagagattatttctcaataccttattgcctggctgtctgtagttggt
caagtggttgggctaagggttccattcgaaatagtaaagttgccttcctag
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