Cryptomeria japonica (Japanese cedar): 131043795
Help
Entry
131043795 CDS
T10556
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131043795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131043795
NCBI-ProteinID:
XP_059077109
LinkDB
All DBs
Position
5:856835965..856947066
Genome browser
AA seq
476 aa
AA seq
DB search
MAPKWRKAQGENARLKIMEVRDDLTVCTISELEDARNQPSLKWQKPGGTQVTCLFRDQAG
RPHPSGGDVAHTWHIGGQTSKETCGGDEVLFLVFIFYVVVLFAFYLFGFCLSLLAFLFVI
LSCFINYNAIDKCWRRDPNWANHRTSLANCAKGFGSYAMGGIGGGIYIVTRDDDNALNPL
FGTLRYGVTRDQPLWIVFARDMEIHLQMPLFFASHKTIDARGAKVTISNGACITLYNTSN
VIIHGLTIHDCQPSGSGDVLIYESKGVVRDYPMDGDGISVISSRDIWLDHNTISHCSDGL
IDVTLGSTAVTISNNRFFNHNEVMLLGNSDTYTPDLNMRVTVAFNHFGPDLMQRMPRCRL
GYVHVANNYYEPWGIYAIGGSSNPTILSEANWFMGPSDYTKKQVTQQHECTSGSPCVWRS
IHDMFLGGSYFTQSGWGNAYPTYDQRQEFEIAIVNLVPTLTKNVGTLDCLSSKPRW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaaatggcgaaaagcccaaggcgaaaatgcaaggttaaagatcatggaagtt
cgagatgatctaacggtctgcacgatttcagagcttgaagatgcacggaaccaaccgtct
ctgaaatggcaaaagccaggtggcactcaagtgacatgtctattcagagatcaagcaggc
aggccccatcccagtggcggtgatgtggcacacacgtggcatataggtggacagacgagc
aaggaaacatgtggcggtgatgaggtcttatttttggtctttatcttttatgttgtggtt
ctttttgccttttatttatttggcttttgtttatcattgttggcctttttgtttgtcatt
ttgtcttgttttatcaactacaatgccattgataagtgctggaggagagatccaaattgg
gcaaatcacaggacgagtcttgcaaattgtgcaaaaggctttggaagttatgccatggga
ggcataggaggtggaatatatatagtcaccagagatgatgataatgctttaaatcctttg
tttgggactctcagatatggtgttactcgcgatcaacctctgtggatagtttttgcaagg
gatatggagattcatcttcagatgcccttgttcttcgcaagccacaagacaattgatgca
aggggagcaaaagtcaccattagcaatggggcctgcataacgctttataataccagcaat
gttatcatccatggcttaaccattcatgactgtcaaccttctggatctggagatgttcta
atctatgagtccaaaggagtggtgagagattatccaatggatggcgatggtatatctgtt
ataagttctagagatatttggcttgatcataataccatttctcactgcagtgatggtctc
atagatgtgacgcttggctcaacagcagttactatttctaacaacagattctttaatcat
aatgaggtaatgttattaggcaacagtgatacatatacacccgacttaaacatgagggtt
actgtggcattcaaccattttggaccagaccttatgcaacgcatgccaaggtgtagattg
ggatatgtacatgtggcaaataactactatgagccttgggggatatatgcaattggagga
agctcaaatccgaccatcttgagtgaagcaaattggtttatgggtccaagtgattatacc
aagaaacaagtcacacaacaacatgagtgtactagtggttcaccttgtgtatggagatca
atccatgatatgtttttaggaggatcatatttcacacaatcaggttggggaaatgcatat
ccaacatatgatcaaagacaagaatttgagattgctattgtcaatttagtacctacactg
acaaagaatgtcgggaccctagattgtctttcgagcaagcctcgttggtga
DBGET
integrated database retrieval system
