Cryptomeria japonica (Japanese cedar): 131044212
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Entry
131044212 CDS
T10556
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131044212
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131044212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-C2H2_STOP2_C
NRIP1_repr_2
Motif
Other DBs
NCBI-GeneID:
131044212
NCBI-ProteinID:
XP_057833471
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All DBs
Position
6:130532855..130537467
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AA seq
651 aa
AA seq
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MSNLTSASGEASISSDTRGDVNNMAVQPAANNSSNATTVSAQKRKRSLPGTPDPDAEVIA
LSPRTLMTTNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSKEIRKRVYICPEESC
VHHDPARALGDLTGVKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCG
TLFSRRDSFITHRAFCDALAEESARMSAGITVADGHVPESNLLGGAAGHMSVIRGAAAAA
ATASSSPSLQHQFSFPMRPSSRIPETNLLNPRWDATSRSGLSLWVGQAPENSHHMTGGHQ
FGSMDVNPFAPSPKNMQSMLGLSDYDDSPAGKAGNLSALLPNPAALYSNIFSNTADHFGV
ANWADRSGSAQAQPQAQSAARLSLSTSATLTTSTSNNVNTDNSSLYSSTNENNSAQQNPY
MSATALLQKAAQMGATAGNPPMFSAFGMAGSDTGSHHVGLGLSWPDSANQHRMVSGLDHH
GSNPFMTSPQPINFRPSEQQAGLQDLMNSLSAGGAGGGAYFVGSALNGLPFGGDSTTSYG
AAGTRIMSDNNQPSVRQSPLGARNQAQQMMQRRLSAGHGVLGAGNLKDGGDGLTRDFLGV
GGPAEELGRTLNIASLSSGIDLVPYKRENSLSHTVGTANTGFSPPKSWDAS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatttgacatcggcgtcgggagaggcaagcatctcctctgatactagaggagat
gtaaataatatggcggtgcagccagcagcgaacaacagtagcaacgctactactgtttcc
gcccagaaaagaaagcggagccttcctggcactccagaccctgatgcggaagtaatagcg
ctgtctccaaggactctgatgaccacgaaccgattcatctgtgaaatctgcaacaagggt
ttccagagagatcagaacttgcagctgcacaggcgagggcataacttgccgtggaaattg
aagcaaaggagcagcaaggaaatcaggaagagagtttacatatgcccggaggagagctgc
gtccatcacgatccggcgagggctctgggagacctcacaggcgtgaagaagcacttctgt
agaaagcatggcgagaagaaatggaagtgcgataagtgttccaagcgctatgccgttcag
tccgattggaaggctcattccaagacttgcggcacgcgcgagtacagatgcgactgcgga
acgctcttctccaggagggacagctttatcactcaccgagcattctgcgatgccttggct
gaagagagcgcaagaatgtcggcgggaataaccgtagccgacggtcatgtgcccgaaagc
aatctcctgggcggagcggctggtcacatgtctgtaataagaggcgctgcggctgctgca
gctaccgcttcttcttccccctctttgcagcaccaattctccttccccatgagaccctcc
tctcgtataccagagaccaatttgctgaatcccagatgggacgcaacttccaggtctggt
ctatccctctgggtcggccaagcccccgaaaactcccaccacatgaccgggggccatcaa
ttcggttcaatggacgtgaatccttttgcaccgtcaccgaaaaacatgcaaagtatgctt
ggcctgtcagactatgatgattctccggcgggcaaagccggtaacttatcagccctcctg
ccaaatcctgctgctctttattcaaacattttctccaataccgccgatcatttcggggtg
gcaaattgggcagatcgatccggatccgctcaggctcagcctcaggctcagtcagccgca
cgcctttctctatcaacttctgctactttgacgacctccacttctaataatgtaaacacc
gacaatagcagcctatacagtagcactaatgaaaataacagcgcgcagcagaatccttac
atgtcggccacagctttgctccagaaagccgcacagatgggtgcaaccgccgggaacccg
ccaatgttttcagcattcggcatggccggctcagacacaggatctcatcatgtaggactg
ggtttgtcctggccagactctgcaaatcaacaccgaatggtttcaggactcgaccaccac
ggttcgaatcccttcatgacttctcctcaacctatcaacttcagaccctcagaacagcaa
gccgggcttcaggatttgatgaactccctctctgcaggaggcgcgggcggtggtgcttat
tttgtaggtagtgctcttaacggccttccgttcgggggagattccactacgagttatggg
gcggctggcacgagaataatgagtgataacaaccagccatctgtacgacagtctccattg
ggcgcgcgaaaccaagctcaacagatgatgcagagaagattgagtgctggtcatggtgtt
ttaggcgcgggaaatcttaaagacggcggagacggattaaccagggattttcttggcgtg
ggtggacctgcagaagagctcggaaggactcttaatattgcttctctcagttcagggatt
gatttagtcccttacaagagggaaaattcactttctcacacagtgggcactgcaaatact
ggcttttctcctccaaaatcatgggacgcctcctga
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