Cryptomeria japonica (Japanese cedar): 131044221
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Entry
131044221 CDS
T10556
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic isoform X1
KO
K02357
elongation factor Ts
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cjf03012
]
131044221
03029 Mitochondrial biogenesis [BR:
cjf03029
]
131044221
Translation factors [BR:
cjf03012
]
Eukaryotic type
Elongation factors
131044221
Prokaryotic type
131044221
Mitochondrial biogenesis [BR:
cjf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
131044221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
S1_RRP5
EF-Ts_N
UBA_7
OB_RRP5_4th
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
131044221
NCBI-ProteinID:
XP_057833483
LinkDB
All DBs
Position
6:complement(135062403..135100308)
Genome browser
AA seq
1044 aa
AA seq
DB search
MLSAILCPIGTIQYMPGRTVNTRTRKHSKSSVSPQNSIVSAISNKTLPLRSFSNNFTFYQ
RERYSNIGHGSILHRLSASIGKEVTLEEPNIDIDQDAGQSGGVDNPSEGDKSYESGSSSE
TESVAAKDSSSSGQSKLTRNISRNENPRVPNEELVPGATFTGIIRRIQPFGAFVDFGASM
DGLVHISRLSDSFVRDINDAVSVGQEVTVRIVDVKLETGRIALSMKSSDDSNRPSQVQSS
ALNSGEGGVRPVQIGKGAGRFSNEKREVTQKRSKLKQGQIVEGNVKNIVNSGAFISLPDG
EEGFLRSNEASQNLSGKMELQIGQNVSVRVLRIEKGKVNLTMQNEEEEESFKIVLNKGSI
GAASNPFELFFRKDPVISSLLEEKEKLQENGRLVESQAEVAAENLEEQEEEKVGTVGSGE
EAALTEEVDDKISVEDITQIPESIRKDKGSEMLETNESLTNEKTEQVEDFSVLSTEKVVS
TEYLTKEVSDIQDNEVNAMKYISDDKKDVEPIADLENSGPTSEASPNDVSSNYERTAISD
SSHAVSDAYSSGKIINVPGDESPLLVTKTETDTMAPTNSRVISAALVKRLREETGAGMMD
CKKALTETGGDLEKASEFLRKKGLASAEKKATRIAAEGRIGSYIHDSRIGVLIEVNCETD
FVARGEIFKELVEDMAMQIAASPNVQYVSVEDVSEDIVNKEREIELQKEDLLNKPAEIRE
KIVDGRIGKILKELTLLEQPYIKNDKIIVKDWIRQSIATLGENIRVRRFVQYNLGEGLEK
KSQDFAAEIAAQTAANVSPSMLTEKPGTGAESSTIVEEIKPPVEKRTLISAALVKQLREE
TGAGMMDCKKALTETGGDLEKAQEFLRKKGLASADKKSGRIAAEGRVGSYIHDSRIGVLI
EVNCETDFVARGDIFKQLVEDLAMQVVAYPQVQHVSVEDIPKKIVDKEREIEMQREDLLT
KPENIREKIVEGRITKRLAEIALLEQPFIKDDSIRVKDFVKQAVASLGENIRVRRFIRYN
LGEGIEKETKDLATEIAKQTTLKI
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgcaattctttgtcccatcgggactatccagtatatgccaggaaggactgtt
aacacaaggaccaggaagcattcaaaaagttcagtatctccccaaaattccatagtttct
gcgatatcaaataagacattacctttgagatcattttcaaataatttcactttttatcag
agagagaggtattccaacataggacatggctcaatattacacagactttcagcatcaatt
gggaaagaagtgacgcttgaggagccaaacattgacattgatcaggatgctgggcaaagt
ggaggtgtggataatccatcagaaggtgataaatcatatgaatctggctcatcatcagaa
actgaatcagttgctgctaaagattcttcgagttcaggacagtcaaaactcactagaaat
attagcaggaatgagaacccaagagtgccaaatgaagaattggttcctggtgcaactttt
acagggataattagaagaatacagccatttggcgcttttgttgattttggagcttccatg
gatggactagtacatatatccaggcttagtgatagctttgttagagacataaatgatgct
gtttcagttgggcaagaggtgactgttaggatagtagacgtgaaactagaaacaggacgt
attgctctatcaatgaaaagtagtgatgattcaaacaggccaagtcaagtacaatcttct
gctcttaattctggagaaggcggtgttagacctgttcaaattggaaagggtgctggacga
ttcagcaatgaaaagagagaggtgactcaaaagaggtccaaattgaagcaaggacaaatt
gtagaagggaatgtcaagaatatagtaaactctggagcatttatatcacttcctgatggt
gaagaaggctttcttcgttcaaacgaggcatctcagaatctttctggaaaaatggaatta
caaattggacaaaatgttagtgttagagtattgcgtattgagaagggaaaggtgaatttg
acaatgcaaaatgaggaagaggaggaaagttttaaaattgtgcttaataaaggttcaatt
ggagctgcttcaaatccttttgagttgttctttcgcaaagatcctgttatttcttctctt
ttagaagaaaaggagaaactgcaggaaaatggtaggctagtagaatctcaggcagaggtt
gcagctgagaatcttgaggaacaagaagaagaaaaagtagggactgtagggtctggggaa
gaagctgcattaactgaggaagttgatgacaaaatttcagtagaggatatcactcaaata
ccagaaagcattaggaaagataaaggatctgaaatgcttgaaacaaacgagtcattgaca
aatgagaaaacagagcaagtggaagacttttctgtgttatcaactgagaaagtagtttcc
actgaatatctcacaaaagaggtaagtgatatccaagataatgaagtgaatgctatgaag
tatatttcagatgacaaaaaagacgttgaacctatagcagatctggaaaattccggaccc
acttcagaagccagcccaaatgatgtctcttctaattatgagcgaactgcaatttctgac
tcaagtcatgcagtctctgatgcatattcatcaggcaaaattattaatgtgcctggtgat
gaaagccctctgctagtcactaagacagagacagatacaatggcacccacaaactcccgt
gttatttctgctgctcttgtcaaaaggctacgagaggaaacaggagcaggcatgatggat
tgcaagaaggctcttacagaaacaggtggtgaccttgaaaaggcatctgaatttctcagg
aagaaaggactagcaagtgcagagaagaaggctactcgaattgcagctgaagggagaata
ggatcttatattcacgatagtcgtattggtgtgttaattgaagttaattgtgaaacagat
tttgttgcaaggggtgagattttcaaggaattagtagaagacatggcaatgcagattgct
gccagtccaaatgttcaatacgtatctgtagaggatgtttctgaagatattgtgaataaa
gaaagggagattgaactgcagaaagaggatcttcttaataagccagcagaaattagagaa
aaaattgtcgatggacgcattggaaagatacttaaggaattgaccctattagagcagcct
tatataaaaaatgataagatcattgtaaaagactggattagacaaagcattgcaacctta
ggggaaaacattcgagtaagaagatttgttcaatacaatctgggagaaggtttggaaaag
aaaagccaggactttgcagcagagatcgctgcacaaactgctgcaaatgtgtcaccctca
atgctaacagaaaaacctggaactggagctgaatcctctacaatagttgaagaaatcaaa
cctcctgtggaaaagcgaacactcatctctgcagcattggtaaaacaacttcgggaggaa
actggggcaggtatgatggactgtaagaaagctcttacagaaacaggtggtgaccttgaa
aaggcccaggagtttttgaggaagaaaggattagcaagtgctgacaagaagtcaggaaga
atagcagccgagggaagagtaggttcctatatccatgacagccgtattggtgttctaatt
gaggttaactgtgagacagattttgttgcaaggggggatatcttcaagcaactagtagaa
gacttggcaatgcaggtggttgcctatccacaagttcagcatgtcagtgtggaggacatc
ccaaagaaaatagtggacaaggaaagagagatagagatgcagagggaagaccttcttacg
aaacctgagaatattcgagaaaagattgttgaagggcggataacaaagaggttagctgag
atagcactgcttgaacaaccttttatcaaggatgatagcattcgtgttaaagattttgtt
aaacaggcagttgcatctttaggagaaaatattcgagtgagaagatttatacgatacaat
cttggtgaaggcatcgaaaaggaaactaaagaccttgccacagaaattgctaaacagaca
acattgaagatatag
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