Cryptomeria japonica (Japanese cedar): 131044288
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Entry
131044288 CDS
T10556
Name
(RefSeq) WD repeat-containing protein RUP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
cjf04712
Circadian rhythm - plant
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131044288
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131044288
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131044288
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131044288
NCBI-ProteinID:
XP_057833564
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Position
10:27321880..27324420
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AA seq
368 aa
AA seq
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MPDKEEDDADKEKRMGSMGLVFRPVATFTSSGSEASDAISSIDFSPDGSHFATGGLARKI
RLYSFTGNQPAGDMASGSRKRTCPAESAAGLQKLDEIYTPAKLSSLAWCPSDRSVISCGD
YDGVVTDWDAECGVAVVERYDHGGRRVWSVDYSRAEHHPGLCASASADGTVRLWTARTDT
SVAVMRPSSAGASVCSAQFSPFRPNLLTAASADGSFSLFDIRNTEECVTSSRGHARAVSY
VRFVDEARVVSASIDNSVKVWDMELRLERKWEGQHLNVKNFVGLSVLESRGGLIACGSET
NQVFVYHRGDEKSLWRSARLPSADDDAGAFVGAVCWRRVDGGHCDDVHSLLAANSDGSLH
LIHARVLG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgccggacaaggaagaggatgatgcagacaaggaaaagcggatgggaagcatgggattg
gttttccggccggtggcgacattcacatcatccggcagcgaagcttcggacgccataagc
tccatcgacttcagccccgacggctcgcacttcgcaacgggcggcctggcaagaaagatc
cgcctttacagcttcaccggaaatcagcccgccggcgacatggcgtccggatcccggaaa
cgaacctgcccagcagaatccgccgccgggctacaaaagctcgatgagatttacacgcca
gcaaaactgagcagcctggcgtggtgcccgtcggaccgtagcgtgatttcctgcggcgac
tatgacggcgtggtgacggactgggacgccgagtgtggcgtcgcggttgtggagcgctac
gaccatggcggacgacgggtgtggagcgtggattacagtcgggcagagcaccacccgggt
ctctgcgcctccgcctccgccgacggcaccgtcagattatggaccgcccgaacggacacc
agcgtggccgtcatgaggccctcgtccgccggggcctccgtctgctctgcccaattcagc
ccctttagaccgaatctcctgaccgccgcctccgccgacgggagtttttctctgttcgac
attcggaatactgaggaatgtgtgacgagcagccgtgggcatgcccgggctgtgagctac
gtccggtttgtggacgaggcccgagtggtgtcggcgtccattgataatagtgtgaaggtt
tgggatatggagttgaggcttgagaggaaatgggagggacagcatctgaacgtgaagaac
tttgtgggattatcggtgctggagagtcgtgggggattgattgcctgtggatcggagacc
aaccaagtttttgtatatcacagaggtgatgagaaatcgctttggcggagtgctagattg
ccttcggctgatgatgacgcaggggccttcgtgggtgccgtttgctggagacgagtggat
ggtgggcattgcgatgacgttcattctctcctcgccgcaaattctgacgggtctttacac
ctcatccacgcccgagttcttgggtag
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