Cryptomeria japonica (Japanese cedar): 131044552
Help
Entry
131044552 CDS
T10556
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131044552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131044552
NCBI-ProteinID:
XP_057833887
LinkDB
All DBs
Position
9:complement(218242345..218278312)
Genome browser
AA seq
526 aa
AA seq
DB search
MGHWAKSCPLKKSKESKTNSNIKSKKIWQMINNKGDPSTECNQNKDVMDLVNEVKRTGNS
SNDKQDCVYSNNQLESSKEVEQGIELNNKNNSEDQEVGTVSEEKEETILDQEVESASQEK
EETIPASSFSKSGMDFKHSWKLGLLFVVFIAGSTLQHHNVAAADLFMNNNTVSFGESLAV
KKGARPWIKNACGTPDGTKCQFSSCGEGHLLPNCAIGFARGVTGGQGGLSYTVTRSDDNP
NDPAPGTLRYGVSISSTNPKGVWITFSQGMTIRLQKMLLVFSHTTIDGRGVRVIITGSAI
GLNKVQNVIIHNIQVSDSNFDTVHILGSKKVWVDHLTSFGGKLGLVSAVHGSTDITISNC
RLFETNFNMLLGAQDSDKIDQQMRVTVYRNWFKDSNQRNPHCRWGYCHVVNNLYGNWGIY
AIGARVHARIYSERNVFVPGKNHEVTEWYPGYESKWDTTPKIQSTGDQLVNGATFHQFLY
TGRVDAPPYKSGQYPPLTDTERVPRLVGDCSGVLLQGDVQTCLKNG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggcattgggcaaaatcatgtccgctcaagaaaagcaaggaaagcaagactaatagc
aatatcaagagcaaaaagatttggcaaatgataaataataaaggagacccatcaactgag
tgtaaccaaaataaggatgtaatggatttggtgaatgaagtcaagaggactgggaatagc
agtaatgataaacaagattgtgtctactctaacaaccaactagagagctctaaagaagta
gagcaaggaattgagttgaacaataaaaataactcagaggatcaagaggttggaactgtt
agtgaggagaaggaagaaaccattctggaccaggaggttgaatcagctagtcaggagaag
gaagaaactattccagcctcttctttctcaaaatcgggtatggacttcaaacactcttgg
aaattagggctgctctttgttgtctttattgctggttcaacactgcagcaccacaatgta
gctgctgctgatctattcatgaacaataatactgtttcatttggagaatcattagcagtc
aaaaagggtgcaaggccatggataaagaatgcatgtggaacacctgatgggaccaaatgc
cagttttccagctgtggtgaagggcatctcctgccaaactgtgccattggatttgcaaga
ggtgtaacaggtggacaaggaggactttcttacacagtgacccgatctgatgacaatccc
aacgatcctgcaccaggcacattgcgttatggtgtcagtatctcctctacaaaccctaaa
ggagtatggatcactttctcacagggtatgactattcgcttacaaaaaatgttacttgtc
ttcagccacacaactatagatggtagaggagtaagagttatcattactggttctgcaatt
ggtttgaacaaagtgcagaatgttattattcataacattcaggtcagcgacagcaacttt
gatacagttcatatattaggttccaagaaggtctgggtggatcatctcacttctttcggt
ggcaagttgggtttagtgtctgctgttcatggttccactgatatcaccatctcaaattgt
cgtctgtttgagaccaacttcaatatgttgttgggggcacaagactcggacaaaattgat
cagcaaatgagagtcacagtgtatagaaactggtttaaagattcaaaccaacgaaatcct
cattgcagatggggatactgtcatgtggtgaacaatttgtatggaaattggggcatctat
gcaattggggcacgagtgcatgcaagaatttattcagagaggaacgtgtttgtaccaggg
aaaaaccatgaagtaactgaatggtatccagggtatgaatcaaagtgggacactacacca
aaaatccaatccactggtgaccaacttgtaaatggtgcaacatttcaccaattcctttat
actgggcgtgtagatgctcctccttataagagtggtcaatatcctcctctcactgacaca
gaaagagtgccgcgtcttgttggtgattgctctggagttctacttcagggcgatgttcaa
acatgccttaaaaatggataa
DBGET
integrated database retrieval system
