Cryptomeria japonica (Japanese cedar): 131044998
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Entry
131044998 CDS
T10556
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131044998
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
131044998
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
131044998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
DUF1262
Motif
Other DBs
NCBI-GeneID:
131044998
NCBI-ProteinID:
XP_057834482
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All DBs
Position
3:complement(513044165..513163615)
Genome browser
AA seq
673 aa
AA seq
DB search
MKIVTYNVNGLRPRIRFHGSLAKFLNSLNAEIICLQETKLSRKELSIDIAMAEGYESFFS
CTRTTCRGRVGYSGVATFCKVNKAFSSTEVTLPLAVEEGFTGLVNCARLGETNAAVSGIS
NYEVEKGPEGLTRQELLKLDSEGRCIITDHGHFVLFNIYGPFAASDDSERFQFKLYFFKV
LQRRFQAFLGQGRRVIIAGDLNIAPFSIDSCDPGPHFEENMCRKWLRMLLNDGGPFTDAF
RKFHPYRKEAYTCWAQVTGAEEFNYGTRIDLILVAGPCLHQEANSKRHNFINCHIEECDI
LSYFKRNKPDKTPKWQGGRSLKLEGSDHAPVYITISEMPDVAIHDVPALAARYMPELSGR
QQSILSLLQKRQVAEIGLSVVSDFSSRKKCREKSSEREINVSADESKKPEVPLCNMSATD
YCEPSLALIQQPSSEFSEENKFFKNHCLSVSKDSLKSAWFDCIEAKRKQLPMNQNRQTVR
QKKKNESEARQCTLWSFFPVNSTKASKDSSYMICEEVYKSETDQNTQRGNIVSETETAEM
KELNLPTDQSGIQHSQYNMNCNQDGEKDKISVSKSVWEEEKTAQYLEPIILGGKDKVKTA
ALEWQKIQNLMTSSVPLCEGHGEPCVARVVKKAGPNIGRGFYVCARAKGPESNPETRCKH
FEWSSMKGKSKGR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgttacatacaatgtaaatggacttcgcccgcgcatacgttttcatggctcc
ctcgccaaattccttaattccctcaacgcggagatcatatgcctccaggaaacaaaattg
tcaaggaaagaactttcaatagatatagctatggcagagggatatgaatcttttttttca
tgcacacgtacaacatgtcgggggagggttggctactcaggtgttgcaacattttgcaaa
gtaaataaggcattttcaagtacagaagtcactttgccgctcgcagtagaggagggattc
actggtctggtaaattgcgcaaggttgggggaaactaatgcagctgttagtggaattagt
aattatgaagttgagaaaggaccagagggccttacaagacaggaactactgaagcttgac
agtgaaggtcgttgtattatcacagatcatggacactttgtcctgtttaatatttatggg
ccatttgctgcgagcgatgattcagaacgttttcaattcaagctgtatttctttaaggtg
ttgcagagaaggtttcaagcttttctaggtcaaggaaggagggtgattattgcgggtgat
ctgaatattgcaccttttagtattgactcctgtgacccaggaccacattttgaagaaaat
atgtgtaggaagtggttgaggatgttactgaatgatggaggaccctttactgatgcattt
aggaaatttcatccatacaggaaggaagcatacacttgctgggcacaagttacaggtgct
gaggaatttaactatggcacaagaattgatctcattcttgtggccggaccatgcctacat
caagaagctaattcaaagcgtcataattttattaattgccatattgaagaatgtgatata
ttgagctatttcaagcgcaataagccagacaaaacaccaaaatggcaaggggggagaagt
cttaaactcgaaggttctgaccatgctcctgtttatatcacaattagtgaaatgccagat
gttgcaattcatgatgttccagctcttgcagctcgatatatgcctgagcttagtggacgg
caacaaagtattttgtcacttcttcaaaagagacaggtagcagaaattggtctctctgtt
gtatcagatttttcttctagaaagaaatgccgagagaaaagttctgaaagagaaatcaat
gtatctgctgatgaaagcaaaaaaccagaagtacctttatgcaatatgtctgctacagat
tactgtgaaccatcattagctttaattcaacagccctcttcagagttctctgaagaaaac
aagttcttcaaaaatcattgcctttcagtttcaaaggattccctgaaaagtgcatggttt
gattgcattgaagcaaagagaaaacagctccctatgaatcaaaacaggcaaacagtccgt
caaaaaaaaaagaatgaaagtgaagctcgtcagtgcaccttatggagtttttttccagtg
aactcaacaaaggcatcaaaagatagcagttatatgatatgtgaagaagtatataaatca
gaaaccgatcaaaatacacaaagaggaaacattgtttctgaaacagaaaccgctgaaatg
aaagaactaaatcttcccacagatcagagtggtattcaacattcccaatataatatgaac
tgtaaccaagatggtgaaaaggacaagattagtgtctcaaagagtgtgtgggaagaagaa
aaaactgcacagtatctggaaccaattatattaggggggaaggataaggtcaaaactgca
gctctggaatggcagaagattcagaatctgatgactagcagtgtgcctctttgcgaaggc
catggtgagccttgtgttgctcgtgttgtaaagaaagcaggcccaaacattggtcgtgga
ttttatgtgtgtgcccgtgctaaggggcccgagtcaaatccagaaacacgttgcaaacac
ttcgagtggtcttccatgaagggaaagagtaaaggaagatga
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