Cryptomeria japonica (Japanese cedar): 131045319
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Entry
131045319 CDS
T10556
Name
(RefSeq) nuclear pore complex protein NUP54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131045319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131045319
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131045319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
C12orf66_like
Motif
Other DBs
NCBI-GeneID:
131045319
NCBI-ProteinID:
XP_057834875
LinkDB
All DBs
Position
8:complement(354846254..354919792)
Genome browser
AA seq
496 aa
AA seq
DB search
MFGSGSSPAFGAGFSSMPGSSPLFGSTSSPNFGSSSASSFSASSSQPLFGFSTSQSGFGL
QGSMSSPFGQSTSSPAFGQTQSSFLGQPTLQQASSSGQISSFGQTQPSLFGGVQSAPFGQ
TQMTPFGGAQSSIFGQTQKLTPGFGQTEPSMFGNTQQSIFSGSQLTTQMAPVAPVAIPLP
DRDIQAIVDAYKDEAGNHKYSFKHLLLSVTDPSMRVKPVGVSDIIWAEAMNKLEGMESGD
RERLWPESVQGFKDLSRRLKVLFKLFSKTMPNRLIRFLYTKTIRVRTNYCAVRLLVPPSI
YMQDEVIAADAQRLQTTQTNVKMLERHFQVDTLTWIQRLRQKEKELQRCLLRVMRIVEAL
EGKGFHIPTTRGETFLGVQLRTLTRQLQGPGAELPRRINTLMSISRVRSQVEGAHTLLPG
LAKVDEQSLVDMHELLRQQTDAISSLASILRKDTRNTEILVSEDTEMTDEAAESDFRRSG
RNGTLHAYNTNSLNGY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtctggttcgtcccctgcctttggtgcaggcttttcttcaatgcctgggtct
agtccattatttggttctacttctagtccaaactttggctccagttcagcttctagtttt
agtgctagctcctcacaacccttgtttggcttttcaacttcccagtctggttttggtttg
caaggaagcatgtcttcaccttttggtcagtcaacatcatcgccagcgtttgggcagaca
caatcatctttcttaggacagcccaccctgcaacaggcatcctcttccggtcagatctca
tcatttgggcaaacacagccttctctctttggtggagtacagtcagctccttttgggcaa
actcagatgactccttttggtggtgcacagtcatctatttttgggcaaactcagaaattg
actcctggctttggccaaacagaaccgtcaatgtttggtaacactcaacagtcaattttc
agtggtagtcagttgacaactcagatggcaccagttgcacctgtggcaatacctcttcct
gacagggatatccaggcaattgttgatgcatataaagatgaggcggggaatcacaaatac
agttttaagcaccttttgcttagtgtgactgatccatcaatgcgtgtgaagccagttggt
gtatctgatataatatgggcagaagccatgaataagctggaaggcatggagagtggagat
cgagaaaggctgtggcctgaatcggttcaaggtttcaaagatctttcacgtcggttaaag
gtactgtttaaactgttttctaaaactatgcctaataggctaatacgctttctctataca
aagactataagagtcaggacaaattactgtgcagttcgtttgcttgtgccaccaagtatc
tatatgcaagatgaggtaatagctgctgatgcacagagacttcaaacaacacaaactaac
gttaagatgctggaaagacattttcaagtggacactctgacctggattcaaaggttaagg
caaaaggaaaaagaattacagcgatgtcttttaagggttatgaggattgtggaggcttta
gagggaaaaggatttcatattccaaccacaagaggggaaaccttcttaggtgtacaattg
cgtacactaactcgacaacttcaaggacctggtgcagaattgccacgtaggatcaatact
cttatgtcaatttctcgagtacgatctcaagttgaaggagcacataccttgcttcctgga
ttggccaaagtagatgaacaaagtctggttgacatgcatgagctcttacgccagcaaaca
gatgccatttctagtcttgctagcattttaaggaaggatacaagaaatacagaaatctta
gtttcagaagatacagagatgacagatgaagcagctgaaagtgatttcagaagatctgga
agaaatggaactttgcatgcctataatacaaatagcttgaatggctattga
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