Cryptomeria japonica (Japanese cedar): 131045321
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Entry
131045321 CDS
T10556
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03015
mRNA surveillance pathway
cjf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131045321
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131045321
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjf01009
]
131045321
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131045321
03036 Chromosome and associated proteins [BR:
cjf03036
]
131045321
Protein phosphatases and associated proteins [BR:
cjf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131045321
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131045321
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131045321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
P2R3B_EF-hand
Phage_Inh_C
DUF4187
SOBP
Motif
Other DBs
NCBI-GeneID:
131045321
NCBI-ProteinID:
XP_057834880
LinkDB
All DBs
Position
8:347650472..347741006
Genome browser
AA seq
546 aa
AA seq
DB search
MDVCVDWDVLQLQEMMIMQPGGVGGGGALKGNPYKAHIDHLFSQWLSLPDTVKLVTSLLE
EAKAGSTLSVAGSSYNANTGSNNSVLPNMFPSGSAPPLSPRSVSGSPRSVMRRHGAGPSS
LGSPLKFSSEPVKEVIPPFYFHNGPPLPKELAEQYLARIDQLFFGHMDGLRVEDFKAVTK
EICKLPSFFSSMLFKKIDVDDTGVVTRDQFVSYWIDKKMVTMDQPTQIFSILKQPDRNYL
TQDDFKPLLRELLATHQGLEFLQSTHEFQERYAETVIYRIFYYINRSGNGNITLRELKRG
NLIPAMHHVDEEEDINKVLKYFSYEHFYVIYCKFWELDTDHDFLIDKDNLVRYGSHALTY
RIVDRIFSEIPRKFTSKVKGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCVDLDSNGVLTS
NELQFFYEEQLHRMECMAQEPVLFEDIVCQMVDMIAPEKECQFTLRDLKRCKLSGNCFNI
LFNLNKFMAFETRDPFLIRQEREDPTLTEWDRFAHKEYIRLSMEEDAEDASNGSAEVWDE
SLEAPF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctgcgtggattgggatgtgttgcagttgcaggagatgatgataatgcagccg
ggaggggtaggtggaggtggagcgctcaagggcaatccatacaaagctcacatcgatcac
ctcttttcgcagtggctctcccttcccgacaccgtcaaactcgtaacttcattacttgaa
gaagcaaaagcaggcagtactctgagtgttgcagggagttcctacaatgcaaatacaggt
tcaaataattctgtattgccaaatatgtttccatctggcagtgcacctccactttcgcca
agaagtgtttctggttccccacggtcagtcatgagacgacatggagcaggacctagttct
cttggatctcctctgaaattttccagtgaacctgtgaaagaagtcatcccaccgttttac
tttcacaatggtccaccacttccaaaggaactggcagaacaatatttggcaagaattgat
cagctttttttcggacacatggatggcttacgagtagaagactttaaagctgtgacaaag
gaaatttgcaagctaccttcattcttttcgagtatgcttttcaaaaagattgacgtggat
gatacaggagtggtgacaagggaccagtttgtttcttactggattgacaagaaaatggtg
actatggaccaaccaacccaaattttctcaattttgaagcagccagatagaaattatctt
actcaggatgatttcaagcctctattgagagagcttttggctactcatcaaggattggaa
tttttgcagagtacacatgagtttcaagaaagatatgcggaaactgtgatttataggatt
ttctactacataaataggtctggaaatggcaacattacactgagggaactgaagcgtgga
aatctaatacctgcaatgcaccatgtagacgaggaggaggatattaacaaagtgttgaag
tacttttcttatgaacacttttatgtgatatactgcaaattttgggagcttgatacagac
catgattttttaatcgataaagacaatcttgtaagatatgggagccatgcattgacatac
cggatagttgataggatattttctgagattcctagaaagtttactagtaaagttaaaggg
aagatgggatatgaggactttgtttactttatgctgtctgaggaagacaagtcatccgaa
cccagtcttgaatactggttcaagtgtgtggacttggatagcaatggtgttctcacatct
aatgagctgcagtttttttatgaggagcagttgcatcgcatggaatgtatggctcaagag
ccagttctctttgaggacatagtatgccaaatggtggatatgattgctcctgagaaagaa
tgtcaatttacgctacgggatctgaagcgatgcaagttgtcgggaaattgtttcaatatt
ctttttaatctgaacaaatttatggcttttgagactcgagatccgttccttattcgccaa
gaacgggaagatcctacattgaccgagtgggatcgttttgcacacaaagaatatatcaga
ttgtctatggaagaagatgctgaggatgcttctaatggcagtgcagaagtctgggatgaa
tctcttgaggcccctttttga
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