Cryptomeria japonica (Japanese cedar): 131045730
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Entry
131045730 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131045730 isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131045730
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjf04812
]
131045730
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
131045730
Membrane trafficking [BR:
cjf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
131045730
Cytoskeleton proteins [BR:
cjf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
131045730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_14
DUF815
Mg_chelatase
IstB_IS21
RNA_helicase
AAA_2
nSTAND3
NPHP3_N
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
131045730
NCBI-ProteinID:
XP_057835304
LinkDB
All DBs
Position
9:complement(650281518..650392044)
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AA seq
523 aa
AA seq
DB search
MGLLESLSALISSWYDEFQTPSNPVETHPPASPPPPVNSMENPAPRVSSNNDKVPAKKLS
QKLKGYFDLGKEEIDKAISCEEWGLPDDAVAHYLNAQRIFAEAMSQQVTLDSSSGSEEIK
NYRGKILKWQGKVSERLQILSRRSEVTSSKQKVSRPQQSQIPAKMNVSRPQQSQKPARMN
ISSPVKSQIPARSKSFSQKSSGAKQNISQTSAPTNISSSSQSHGTNVKGVDPKFSEIIES
VIVDKSPAVKWDDVAGLAKAKQALMEMVILPTKRSDLFTGLRKPARGLLLFGPPGNGKTL
LAKAVASEASATFFSIAASSLTSKWVGEGEKLMRALFAVAVARQPSVIFMDEIDSIMSAR
SANEHEASRRLKSEFLIQFDGVMSNSDDRVIVMGATNRPQELDDAVLRRLVKRIYVPLPD
ADVRRVILKHQLKGQAFSLPAAELERLVKDTDGYSGSDLQALCEEAAMIPIRELGSRIST
IKADQVRPLTYADFKEALRVIRPSVAKNKLEEYEIWNEEFGSR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggactccttgaaagtctttctgccttgatttcttcctggtatgacgaattccaaacc
ccttcaaatccagtggagacgcaccctcctgcttctccccctcctccagtaaattcaatg
gaaaaccctgcacctagggtttcttctaataacgataaagtgccagccaaaaagttatcc
caaaaattgaagggttatttcgatcttggaaaagaggagattgataaagcaatctcttgt
gaagaatggggtttgccagacgatgccgtcgctcattatttgaatgcgcagagaattttc
gcagaggcgatgtcacaacaggttacattggactcatccagtggttctgaggagatcaag
aattatcgaggaaagatattgaaatggcaagggaaagtttctgagaggttacaaatattg
agtcgtcgatcagaagtgacatcatcaaaacagaaagtttcaaggccccagcaatctcaa
attccagctaaaatgaatgtttcaaggcctcagcaatctcaaaaaccagctagaatgaat
atttcaagtcctgttaaatctcagataccagctagatcaaaatcattttcccagaagtcg
tctggtgccaagcaaaatatttctcaaacaagtgccccgacaaatatctccagcagttct
caatcccatggaaccaatgttaaaggggtagatccaaaattttcagaaataatagaaagt
gtgattgttgataaaagtccagcagttaaatgggatgatgttgccggacttgcaaaagca
aaacaagctttgatggaaatggttatattacctaccaaaagaagtgatcttttcactggt
cttagaaaaccagctcgaggattacttctttttggaccacctgggaatggtaaaacattg
ctggctaaagctgtggcatcagaagcatcagccacattctttagcatagcagcctcctct
ttaacatcaaaatgggttggagagggtgagaaactcatgagggctctttttgctgttgca
gttgcaaggcaaccatcagtgattttcatggatgagatagacagtataatgtcagcaagg
tcagcaaatgagcatgaagctagcagaaggctgaagtcagagtttcttattcagtttgat
ggggtgatgtcaaattcagatgatcgtgttattgtcatgggtgcaacaaacaggccacaa
gaattagatgatgctgttcttcgtagattggtgaagagaatatatgttcccttgccagat
gcagatgttaggcgagttatactgaagcaccagcttaagggccaggcattttctctgcca
gctgctgagttggaaagacttgttaaggacactgacggctactctggaagtgatctacaa
gcattgtgtgaagaagctgcaatgataccgattagagagctgggttcgcgtattagcaca
attaaggcagatcaggttcgtccattgacatatgctgatttcaaggaagcattgagggtt
atacgaccgagtgtagcaaagaataaattggaagaatatgaaatttggaatgaagagttt
ggctcaagatga
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