Cryptomeria japonica (Japanese cedar): 131045991
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Entry
131045991 CDS
T10556
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131045991
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjf01002
]
131045991
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131045991
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131045991
Peptidases and inhibitors [BR:
cjf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131045991
Ubiquitin system [BR:
cjf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131045991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
DUF3481
Motif
Other DBs
NCBI-GeneID:
131045991
NCBI-ProteinID:
XP_057835606
LinkDB
All DBs
Position
6:664801283..664831262
Genome browser
AA seq
1166 aa
AA seq
DB search
MDTQSSSGTAVDNSSAAESSGKHVEWAGKPCQHLEKGIDLEKLEQYISRVSLLQCQGCGE
LRKGSNASASKDKKGKSKMYVKKSVAKDEWLRTWMCLACGHVGCSSISNASEVIGTGHTW
KHWLDTNHPYAVQWGENVRCWCFSCKALLEFGFLEEEENKGLVMVGPSAGESMLQALKVV
QEKLVKESVKFREIRLTDAIVEKKPLPSEEDGGGSRRLVKGLMNLGNTCFFNSVLQNLLA
IGVLQDHFSRPAGVSEGRLTSCLRTLYATMTSDGQAATDAGEGCSSSGLLYSGKGRALWE
NRNGIVNPGALFSAVCDQAPSFRGFHQQDSQEFLLYLLDCLNTEELNARKLQNTSFEMFA
EKGDDKTKEPADSNGDQTDKFTSFFSSVFGSELSSTICCSECGHSSVSFESFLDLSLAMP
AKPKPSSSKRWASSSVYTKRLTKIHDDSRKDGQRTVEAGLSSLLNISEVNREPSDEMEET
SCSLYKSIAPGADARETNKSDFPENFGWMDFLDAPAQSADMVIQDTLNTSEIMEVLAQEE
TSMDVSEVTSMGQLSTSTSAFQNQDHINQNAVFSQTETSEKNLSTTEGDFGTNDDQDMMH
VSDWEDNHETGQEEELLQMVGDSEVLFLPYKDIDAADEGSEALGYFQNLSLGSPDGTLDK
QSGDAPDVIDGDFDGFAEMFNEEENSFFQKFETEVGDNFQLNEGNGGDDIWDIELAVTTE
EGSETNKEGPEGIIHPISLDGCLTAFTRPELLSGENAWECENCSSKILNDSCKWCVGVSK
RNKQIQYKQTVISTLNDTGTYEEQVHLVNGGGSISFCKGAVDTNLSKIPEKQTDLSMLEC
NGLSNIEGEIDKHYHLKSSRQTVNCHTKSFSLGLTEKGSNLGQHVARISDLDSSQPYIKQ
CCLSETEFLDSSAITLQAHNSCPDDFSGQGNCGEKLGRSFDEDELMDNNAETRLPNDKSV
TNTHLVTCSQIGKSKQSSSVLGRYNFDSIDCIYDGDKLQNGNMNLSLRGTRLDGSLSKEN
EKQPKGLKRNATKVLLISKAPLVLTIHLKRFGQDMLGRLSKLSGHVTFHNKLDLRPFLDP
SCRCPDKESCIYHLIGVVEHSGSMRGGHYVAYVRGPRDEKMQEVNDEDDPNQSTWYCISD
SSVRKISFSEVLQREAYLLFYEKDVL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggatacccaatcgtcgtctggcacagctgtggataattcctcagctgctgaaagcagt
ggaaaacatgtagaatgggcgggcaaaccctgccaacatttagaaaaaggaatagacttg
gagaaattagagcaatatatttcaagggtatcgcttttgcaatgccagggttgtggcgag
ctcagaaagggttctaatgcttctgcttcgaaagacaagaaaggaaagtctaagatgtat
gtgaagaagtctgtggcgaaggatgagtggcttcgaacctggatgtgcttggcctgtggt
catgtaggctgcagcagcatttccaatgcttccgaagttataggcacagggcatacctgg
aagcattggctcgatacgaaccatccttatgcagtgcagtggggggagaatgttcgctgc
tggtgtttttcctgtaaggctcttctggaattcggatttttggaggaggaagagaacaag
ggtttggtcatggtggggccttccgccggtgagtcgatgttgcaggccttgaaagttgta
caggagaagctcgtcaaggaatctgtgaagtttagggaaattcggctaactgatgctatt
gtggagaagaagccgctgccatccgaggaagatggaggtggaagtaggcgtttggttaaa
ggtctgatgaatttaggaaacacttgctttttcaattcggttttgcagaatttgcttgct
attggtgtgcttcaggatcattttagtaggccggcaggtgttagtgaaggacgcctgact
agctgtttgagaacgctttatgctacaatgacctcggacgggcaagctgccacagatgca
ggagaagggtgttcaagttccgggcttttatatagtgggaaggggagggcattatgggag
aacaggaatggaattgtcaatcctggtgctcttttttctgccgtttgtgatcaggcccct
tctttcagagggttccaccagcaggatagtcaggagttcttgttatacttactcgattgc
ttgaacaccgaagagttaaatgcaagaaagttacaaaacacttcttttgaaatgtttgcc
gagaagggggatgacaaaacaaaagaacctgcagacagcaatggagatcagaccgataag
ttcacgagctttttctcgagtgtgtttggtagtgagctgtctagtaccatatgctgctct
gagtgtgggcattcatcagtcagttttgaatcatttcttgatctatctctggctatgcca
gcaaaaccaaagccatcatcctctaaaaggtgggcttcttcatcagtatatacgaaaaga
ttaacaaagatacacgatgatagtagaaaggatggccaacgaacagtagaggcaggtttg
agttcacttctgaatatatcagaggtcaacagggagccatctgatgagatggaagagaca
tcatgctcgctctataaaagtatagcacctggggcagatgcgagagagacaaacaaatct
gattttccagaaaattttggatggatggactttttggatgcaccggcacaatctgcagat
atggtaattcaggatactctgaatacatcagaaattatggaagttcttgcgcaagaggaa
acttcgatggatgtctctgaagtgacgtcaatggggcaactatctactagtacgtctgct
tttcagaatcaagatcacataaaccagaatgccgtgttttctcaaacagagacatctgag
aaaaatctgtcaaccactgaaggggattttggtactaacgatgaccaggatatgatgcat
gtatctgattgggaagataatcatgagacaggacaggaggaggagctgcttcagatggtg
ggggactcagaagttctgtttcttccttacaaggatattgatgccgcagatgaaggatct
gaagcactcggatattttcagaatctgtctttaggaagcccagatggaactttagacaag
cagtcaggtgatgcacctgatgtaattgatggcgattttgacgggtttgcagaaatgttt
aacgaggaagagaactccttctttcagaaatttgaaacagaagttggtgataattttcag
ttaaatgagggaaatggtggagatgatatatgggacattgagttagctgttaccactgaa
gaaggcagtgaaacaaacaaggaaggtcctgaaggcattattcatccaatctctcttgat
ggttgtttgactgctttcaccaggccggaactgctttctggtgaaaatgcttgggaatgt
gaaaattgttcttccaagattttaaacgattcttgcaagtggtgtgtgggtgtgtcaaaa
cggaataagcagattcagtataaacaaactgtaatatcaactttaaatgatacaggtaca
tatgaggagcaggtgcatttagtaaatggcgggggaagtatcagtttttgtaagggagca
gtggacaccaatttgagcaagatacctgagaaacaaacagatttatctatgttagagtgt
aatggactttcaaatattgaaggagagatcgataagcattatcatctgaagagttcaaga
cagactgtaaactgtcatacaaaatctttttctctgggtctcactgaaaaaggcagtaac
ctgggtcagcatgtagctaggatcagtgatttggatagcagtcaaccatatattaaacaa
tgctgtctctcagagacagaatttttagatagcagtgccatcactcttcaagctcacaac
agttgtccagatgatttttctggtcaaggaaattgtggggagaaattagggaggagtttt
gatgaagatgaattaatggacaacaatgctgaaactcgtttaccgaatgacaaatcagtt
accaatacacaccttgttacctgtagccaaattggaaagagtaaacagtcttcttcggtg
ttggggagatataattttgattccatagattgtatttatgatggtgacaagctacagaat
ggaaatatgaatttgtccttgagaggcacaagattggatggaagtctttctaaggaaaat
gagaagcagccaaagggtttgaagcggaatgcaactaaagtgcttctcattagcaaggca
ccacttgtactaaccattcatttaaagaggttcggacaagatatgcttggccgcttaagc
aaattgagtggccatgtcacttttcacaataagcttgatttaaggccatttctagacccc
agttgcaggtgtccagataaagaaagttgtatttaccatctaataggagttgttgagcac
tctggttctatgagaggtgggcattatgttgcttatgtcaggggtccgagggatgaaaaa
atgcaagaggtaaatgatgaagatgatcctaaccaaagtacatggtattgtattagtgac
tcatctgtgcgtaagatatccttctcggaggttcttcaaagagaagcttacctgctgttt
tatgaaaaagatgtgctttga
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integrated database retrieval system
