Cryptomeria japonica (Japanese cedar): 131046322
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Entry
131046322 CDS
T10556
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjf01009
]
131046322
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131046322
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131046322
Protein phosphatases and associated proteins [BR:
cjf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131046322
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Helicases
131046322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
131046322
NCBI-ProteinID:
XP_057836018
LinkDB
All DBs
Position
2:203610943..203706083
Genome browser
AA seq
585 aa
AA seq
DB search
MEGDGDGVFADCSFADLGLNPILSEQLEGRMGFKVPTLIQKQSIPIILSGCDVLVNAGTG
TGKTIVYLAPIIHHMQAYVPRINRSDGTFALVLVPTRELCMQVYEVLQKLLHRFHWIVPG
YIMGGENRSKEKARLRKGITVLVATPGRLLDHLKHTSSFVHNRLRWLVCDEADRLLDLGF
GKDIAEILTLLEPGQLGYGNEKTDNYDPSNDLYRRQNLLLSATLNDQVNNLAKISLNDPV
NIGLEESRSFHGEVEASSGSTTDVETNKGAHFDSSNSTTEYKFPAQLVQSYMKVPCGMRL
VVLLALLQSQYTAEPSCKVVVFFSTCDAVDFHYALISEFHWVSNFGEGLDEKEGSFIGCK
TFRLHGNMAQEDRKQTFHHYNVEKSAILLCTDVAARGLDFPKVRCIIQYDSPGDASEYVH
RVGRTARLGQKGEAILFLQPIELDYLKELQKHGVPLNELSVKKILDHIQVNGIVKNHKQG
KWTTLEMHPRALSMQKALESFIMAEVSMKQLAKDAFCSFVRAYAAHRGDLKRIFQVKKLH
LGHVAKSFGLKEQPSLVGRSFNKQNKKRERSQMHNKWSKKKRRVT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacggagatggagttttcgcagattgctcctttgcagatttgggcctcaac
cctattctttctgaacaactagaaggtagaatgggcttcaaagtaccaactctcatccag
aagcagagcattccaatcatcctttcaggatgtgacgtacttgtgaatgcaggaactggt
actggcaagacaattgtatatcttgcacctattattcaccacatgcaagcatatgttcct
cgtatcaatcgctcagatggaacttttgcgttggtgcttgtgccaacacgggaattgtgt
atgcaggtttatgaagtattgcagaaattgttgcaccgtttccattggattgttccagga
tatataatgggtggcgagaacaggtcaaaggagaaagcaaggttgcgtaaaggaataact
gttctagttgctactcctggacggcttttggatcacttaaagcatacttcatcttttgtt
cataatcgccttcgctggttagtctgtgatgaagcagacagacttctggacctaggattt
ggtaaagacatagcagagatattgaccctgttggaaccagggcaacttggatatgggaat
gagaagacagataactatgatccttctaatgatttgtatcggcgtcagaacttgctattg
tctgcaactttgaatgaccaagttaataatcttgcaaaaattagcttaaatgatccagtt
aacattgggttggaagagagtaggtctttccatggcgaggttgaagcttcctctggtagt
accacagatgtagaaacaaataaaggtgctcactttgattctagtaattcaacaacggaa
tataaatttccagctcagttagttcaaagctacatgaaagtaccttgcggtatgaggttg
gtagtgttgttggctcttttacaatctcaatacacagcagaaccttcttgcaaggtggta
gtgttcttctccacatgtgatgcggtggattttcattatgctttgataagtgaatttcac
tgggtgtcaaattttggagagggcttggatgaaaaagagggaagtttcataggctgcaaa
acttttcgtctacatggcaatatggcacaagaagatcggaaacaaacttttcatcattac
aatgtagaaaaatctgctattctcttatgcactgacgtggcagcaagaggcttggatttt
ccaaaagtgagatgcattatacagtatgactctcctggtgatgccagtgaatatgtgcac
agggttggcagaacagctcgtctgggccaaaagggggaagctatattatttttgcagcct
attgagttggattatttgaaagaattacagaaacatggtgttcctttgaatgagctttcg
gttaaaaagattctagatcacattcaggtgaatggaatagtgaaaaatcataaacaggga
aaatggactacacttgagatgcatcctagggcattgtctatgcagaaggccctggaatca
ttcattatggcagaggtaagcatgaaacagcttgcaaaagatgctttctgttcttttgta
cgtgcatatgctgctcatcgaggcgatctcaaaaggatatttcaggtgaagaaacttcat
ctgggccatgttgcaaagagctttggccttaaagagcagccatccttggttggaagatca
tttaacaagcaaaataagaagagggagaggagtcaaatgcataacaaatggtcaaaaaag
aagaggcgtgttacatga
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