Cryptomeria japonica (Japanese cedar): 131046425
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Entry
131046425 CDS
T10556
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04148
Efferocytosis
Brite
Membrane trafficking [BR:
cjf04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
131046425
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131046425
NCBI-ProteinID:
XP_057836142
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Position
1:297978568..298048475
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AA seq
1013 aa
AA seq
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MVKESTEDAASNGDGGGGTPRVNGDKTTALPIAVTAEANSDNDQNHTMIYSNNNNLNDGV
DGDDERDDDEDDCPEEEEEEEEEEEEEEPQFKYQKMGGSISTVLHSDAASCITVSDRMIA
LGTLDGTVHILDCQGNQVKEFAAHTATVNDLSFDLDGEYIGSCSDDGSVVVNSLFTDERV
KFEYRRPMKAVALDPDYARKTSKRFSAGGLAGELLLNTKGWLGYRDQVLHSGEGPIHAVK
WRSSLLAWANDIGVKIYDTASNQRITYITRPDNCPRAELLQPHLVWQDDTLLVIGWGTSV
KIAAIRSKPNGGTNATDRKYASYTGAKHVDIVAVFQTTYFISGLAPYGDALVILAYIPDR
EDGENEVGNTVPSRQGCAQRPEVHIVTWKNEDLATDELPINGFEHFKAKDYLLAHASFSG
SSGAGGQLVAGEEPLYYIVFPKGVIIAKPRDADDHIAWLLQHQQHDKALAAIEAGKARIE
LLDEVGSKYLHFLVFSERQYAKAAALCPKLLHGSATAWERWVFEFARDRQLPLLVPYIPT
NNPQLRDTVYEAALIALATNPAFHKQLLSTIQTWPSSIYSTSTVIDAIEPQLNMSSTTPT
LREALADLYVIDKQYEKAFAIYADLRKPGIFEFIEEHNLYDSLQGKAEALMNLDLKRAVV
LLVQQRKFIPPSDVVSQLLKFGNDKTHRLYLHEYLHALFETDPNAGEDFHGLQVELYAEY
EPRLLENFLLSSQHYSLDKAYEICIRRGLIKEQVFILGRMGNSRKALALIINKLEDMEQA
IEFVTMQHDDDLWEELIKQSLSNPEMVGMLLEHTVGNLDPLHIVNMVPNGLPIPRLRDRL
VKIITDYRTETSLRHGCNDILKADCVNLLVKYYYEARHGIYIGSREDEFNANKHRARDDR
GQRNGKSTTKNLNSRATGRCCICLDPISIQNVSIVAFFCTHTYHTTCLTDTSSSVTKNST
QKSNPKVSRGFGDPDDNSFDDEESDDGSSTDSDGLRMRCILCTTAAKSSKRKA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagagtcgacggaggatgctgcttctaatggcgacggtggcggtgggacccct
cgtgttaacggagataaaaccacggcgcttccaattgcagtcacagctgaagcgaactca
gataatgaccagaatcatactatgatttacagtaataataacaatcttaacgatggcgtt
gacggcgatgacgagcgtgacgatgacgaagatgactgtcctgaagaggaggaggaagaa
gaagaggaggaggaagaagaggagcctcagtttaagtatcaaaaaatggggggcagcatt
tcgactgttttgcacagcgatgcggcgtcatgtataacggtctccgaccgcatgatcgca
ctggggacgcttgatggcactgtgcatatactcgattgtcagggcaaccaggttaaagaa
tttgcggctcacactgctacagtgaatgatcttagttttgatttagatggcgagtatatt
gggagctgctcagatgatggatctgttgttgtaaatagtttattcacagacgaacgggta
aagtttgaataccgccgtcctatgaaggcagttgctcttgatccagattatgcaagaaag
acatctaagagattttctgctgggggccttgctggtgaacttttacttaacacaaaggga
tggctagggtatcgtgatcaggttctacactctggagaaggtcctatccatgcagtgaag
tggaggagtagtcttttagcatgggcaaatgatattggtgtgaaaatttatgacactgca
agtaaccaacgcattacatatatcacaagaccagataactgtccacgtgcagagctttta
caacctcatctagtttggcaggatgatacacttttggtcataggttgggggacatctgtg
aaaattgcagctattcgttcaaaaccaaatggaggaacaaatgcaacagataggaagtat
gcatcatatactggtgcaaaacatgtggatattgtggctgtatttcagacgacttatttc
atttctggacttgcaccatatggagatgctctagttattctagcatatatacctgatagg
gaagatggagaaaatgaagttgggaacactgtaccatcacgacaggggtgtgcccaaaga
ccagaggtacatatagtgacttggaaaaatgaagaccttgcaacagatgaacttccaata
aatggatttgagcatttcaaggccaaagattatttgcttgcacatgcttctttttcaggg
agcagtggtgcaggagggcagttggttgctggagaggagcctctatactatatagttttt
cctaaaggtgtaatcattgcgaagcctagggatgcagatgaccatatagcttggcttctt
caacatcaacaacatgacaaggcattagctgcaattgaagcaggcaaagcccggattgaa
cttcttgatgaggtgggctcaaaataccttcatttcttagttttttcggaaaggcaatac
gctaaagcagctgctttgtgcccaaaattgttgcatggatctgccacggcatgggagaga
tgggtgtttgagtttgcacgtgatcggcagctaccccttttggtaccgtacatccccacc
aacaatcctcaactacgagatactgtgtatgaggcagctctaatagctctagccacaaat
ccagctttccataaacaactattgtcaacaattcaaacttggccatcatctatatatagc
acatccactgtcattgacgctattgaaccacagttaaatatgagttccacaactccgact
ttgcgagaggccctagctgatttgtatgtcattgataaacagtatgagaaggcttttgca
atatatgcagatctgaggaagcctggcatatttgaatttattgaggagcataatctatac
gattcattacagggcaaggcagaagctctgatgaatttagatttgaaaagagctgtagtc
ttacttgtccagcaacggaagtttatcccaccatctgatgtagtttcacagttgttgaag
tttggcaatgataagacacacagattatacttgcatgaatatttgcatgcactatttgag
acagatcctaatgcaggggaagactttcatggccttcaggtagagctttatgcagaatat
gagcccagattgcttgaaaatttccttctcagtagccagcattactctcttgacaaggct
tatgagatttgtatcagaagaggccttataaaagagcaagtatttattcttgggaggatg
ggcaattcaaggaaggctcttgcactgatcataaataaattggaggatatggagcaggct
atagagtttgtcacaatgcaacatgatgatgatctgtgggaggagctgattaagcaaagc
ctcagcaatccagaaatggttggaatgttactggagcacacagtcggtaatctagatccg
cttcatattgtaaatatggtaccaaacggtttgcctatcccaaggttgagggaccggctt
gtcaaaattatcacagattatcgcacagaaacttcacttcggcatggttgcaatgacatt
ctgaaggctgactgtgtgaacctgctggtgaaatattattatgaggctcgtcatggtatt
tacattggaagtagggaagatgagttcaatgcaaataagcaccgggctagagatgacaga
ggacagagaaatggaaagagcacaacaaagaacttgaattcaagggccactgggaggtgt
tgcatatgcttggatcccatctctatccagaatgtttcaattgtagctttcttttgcact
catacttatcataccacctgtcttacggacacaagttcatcagtcacaaaaaattcaacc
caaaaaagcaacccaaaagtttccagaggatttggagatccagatgacaactcttttgat
gatgaagaatcagatgatggctctagtactgattctgatgggctgcgaatgcgttgtatt
ctgtgcactacagctgcaaaatcatcaaaaagaaaagcctga
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