KEGG   Cryptomeria japonica (Japanese cedar): 131046549
Entry
131046549         CDS       T10556                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131046549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjf03021]
    131046549
Enzymes [BR:cjf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     131046549
Transcription machinery [BR:cjf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     131046549
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Peptidase_M41
Other DBs
NCBI-GeneID: 131046549
NCBI-ProteinID: XP_057836292
LinkDB
Position
3:731685332..731710988
AA seq 933 aa
MKARLDKEVEKKKEYKREVERLGEYIQHLTKQLNQANPEVLPPLNSQEIVRSFEEEVVTA
RETKEWMESTSKEAATFVENLALTYGQTTSLLSKIASMVEAWADLQDIQDRIVPCLRELK
GVSKQELIDGNIIQAGATCDFNSWHWTLVARSEVLKKVRADADRAEEQIKEIQDKVYVVA
AKVLEKETIREKDMKLENLKTKTQEIFTTGPVWKQNLAKASNLLSIRDAFQKQELDWEIT
FVVCEDDLEGLEFKVSVLPHVTMEEVDQILSKNPSYWGRVCFISTPDGENCGLVKNLAVT
CLVSLHTAQGPIFDSLYQCGITPVGQLSPSDSNDTAKVFINGDWAGICHDPDSLVKKLRD
IRRKLHIHPHVEIKKDDRQNEVRIFSDAGRLLRPLFIVKNKRLCISKQQVEKFKKSKNPF
KFLIKRGIIEILGVEEEEDAQIACGIDILQMAEKNPDYPQFTHCEMDPSFLLSLNASIIP
FANHNLATRTLYQSEKHSRQAIGYYATNSRARFDTSCHQLFYPQRPLFKTMTYECIKKPE
LYNGQSPVVAVNVHYGYNQEDSLVINHASIDRGLFRTMHFHTFTSEAGHDNSGSKSTSRI
EIDFGKPNIEKLRVDKLDEDGLPYISADLCSGDVLIGKVDPQSSDSNVSHKLKHTEKGKV
DQVVLAINNDGKKFARVRLREVRSPELGDKFSSMHGQKGVLGFIEEQENLPFTREGICPD
LIINPHAFPSRQTPGQLFESALSKVISTSGIVLEATPFKPITIEHITEQLHRCGYEQWGK
EQMYNGRTGTKMRSKIFIGPTYYQRLIHMAEDKLKYRNQGPVHPLTRQPIADRKRHGGIK
FGEMERDCMLAHGATANLLERLFYLSDPSRMHICSQCQMVATVILREGIRGPYCPLCKTA
KHVVKVNVPYACKLLYQELFGMGICLRFSTELC
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgaaggcaagactggacaaggaagtagaaaagaagaaagaatacaaaagagaggttgag
cgcctgggagaatacatccagcacttgactaagcaacttaaccaagccaatccagaagtt
cttccacctttgaattcacaggaaatagtcagaagttttgaggaagaagtagtgacggct
agggaaactaaagaatggatggaaagcacaagtaaagaggcagccacatttgtggaaaat
ttagcattaacatatggacaaaccacctctttactctccaaaattgcaagcatggtagaa
gcatgggctgatctccaggatattcaagacagaattgtcccatgccttagagaattgaaa
ggagtttcgaagcaagaattaattgatggaaatataattcaagcaggagctacatgtgac
ttcaacagttggcactggacattggttgcacgcagtgaagtcttgaagaaagtgagggca
gatgctgatagagctgaagagcagataaaagaaattcaagacaaggtttacgttgtagct
gcaaaggtacttgaaaaggaaactattcgagagaaggatatgaagttagaaaatctaaag
accaagacacaagagatcttcactactggaccagtctggaagcaaaatctggctaaggca
tcaaacctcctgtccatcagagatgctttccaaaaacaggaattagattgggaaatcact
tttgttgtatgtgaagatgatttggaaggattagaattcaaagtcagtgtgttgccacat
gtcacgatggaagaggttgatcagattttgtccaaaaatccttcttactggggaagggtt
tgcttcatttccacccctgatggcgagaattgtggactggtaaagaacctggctgtgaca
tgccttgtaagcttgcatacagctcaaggtcctatttttgatagcttatatcaatgtgga
attacacctgttggtcaattatcaccatcagattcaaatgacacggcaaaagttttcatc
aatggagattgggcgggaatctgtcatgatcctgattctcttgtgaagaaattgcgagat
attcgtcgcaagcttcatatccatcctcatgttgaaattaaaaaggacgacaggcaaaat
gaggtccgcattttctctgatgcaggaaggcttttgagacccctatttattgtaaaaaat
aaaaggctgtgcatatctaaacaacaggttgaaaaatttaagaaaagtaaaaacccgttc
aagtttctaataaaaaggggcattatagaaatattaggtgttgaggaagaagaagatgcc
caaatagcttgtggaattgacattttacagatggctgaaaagaatccagactatccacag
ttcactcattgtgagatggacccatcctttctattaagccttaatgctagtatcattccc
tttgctaaccataatcttgcaactagaacgctttaccaatcagaaaaacactcaaggcaa
gcaataggatattatgcaacaaattctcgcgcaaggtttgataccagttgtcaccaatta
ttttatcctcaaagacctttgtttaagactatgacttatgagtgcatcaagaagccagag
ctctacaatggtcaaagtcctgttgttgcagtcaacgttcattatggatacaaccaagaa
gactcattggttataaaccatgcttcaatagatcgtgggctattccgaacaatgcatttt
catacattcacatcggaggcaggccatgataacagtggctctaaaagtacatctaggata
gaaatagattttggaaagccaaacatagaaaaactcagagtggataagcttgatgaggat
ggactcccatatatttctgcagacctttgtagtggtgatgttttaattgggaaggtagat
ccacagtcatctgattcaaatgtcagccacaaattgaagcatactgaaaaggggaaggtc
gatcaagttgtattggcaattaataatgatggtaaaaaatttgcaagagtgaggttgaga
gaagtaagatctccagaacttggagataaattttctagcatgcatggtcagaaaggagtt
cttgggtttatagaagagcaagaaaatttgcctttcacaagagaaggaatttgcccagat
cttatcatcaacccacatgcgtttccttctagacaaactccagggcagctttttgaatcc
gccctttcaaaagtgatttctacaagtggtattgttttagaggctacaccttttaaacct
atcaccattgaacatatcactgaacagcttcacaggtgcggttatgaacaatggggtaaa
gagcagatgtataatgggcggacaggaactaaaatgcgatctaagattttcattggtccc
acctactatcagagactcatacatatggcagaagacaagttaaaatatcggaatcaaggt
cctgttcatcctttaactcgacagccaattgccgatagaaaacggcatggaggtattaaa
tttggggagatggagcgtgattgtatgctagcacacggggcaactgccaatcttttggaa
aggctgttttatttaagcgatccctctagaatgcatatctgtagtcagtgtcaaatggtt
gccacagtgattctccgggagggtataagaggaccatattgtccactctgtaaaactgca
aaacatgttgtcaaagtgaatgttccttatgcatgcaaattgctctatcaagaattgttc
ggcatgggcatatgtctaaggttttcaactgaactgtgttga

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