KEGG   Cryptomeria japonica (Japanese cedar): 131046550
Entry
131046550         CDS       T10556                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131046550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjf03021]
    131046550
Enzymes [BR:cjf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     131046550
Transcription machinery [BR:cjf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     131046550
SSDB
Motif
Pfam: RNA_pol_Rpb2_1 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 131046550
NCBI-ProteinID: XP_057836293
LinkDB
Position
3:731524111..731585155
AA seq 687 aa
MSSAGEAEGSKRNVHETNYQIETEVEAKRMDVDVVDISDESDDCTARNDGVQILSEEMED
TATQMDMTNITEAGAIEKDVLYRAENANGHEIEEDVLYREENTDPDNWDLGDILKEIEKC
GKSMDIDIAEQVQELGSNIDVASVAEETDSSEEEQDISNEFESELSDKDLRTFCRDSSKA
FFDEWGLISHQLNSFNHFMSHGLQKVFDDLGMFDVEPDNTKKRSSSDTLRYWASVTFGKV
TVEKPSYSTREGKRLALKPAEARLRNMTYSSPIYVEITTKVYIQEGMKTNDKSKSSSSSV
MNDAKNLTVVSEERKRVFVGQIPIMVKSHLCYLSSLTCKELLEEGVCSFEVGGYFIINGT
EKVFIAQEERCTNRIWVSNTPSWMAIYTPYTTGFSTYKKKVFVKIIKTSKDDKWCGGRQV
ITVNFLSITVPVVIMFYALGVKSDLEMMQMIGNASNDYDMRELLLSSIYKAEAEIRRFRR
KNKAWDYFNERFEKCKLLKVKDAEEALKEYFFPYIVGYKQKAMFLGYMVNCLISSYFGQR
HVENKDEYKNKRVELAGELLGREVQGLVRHFRNRFSKGIQRELSVHGNINSMEIYADGSI
ITNGLVRAFSTGNWCHPNKFHTKCTGIVASLKSTNPLQTMSEMRRLRLRVQYAAKLGDAR
YPGGKLPLTESWNQKASNNMRFLSPYY
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgagttctgcaggggaggctgaaggcagtaagaggaatgtgcatgagacgaactatcaa
atagaaactgaggttgaggccaaaaggatggatgttgatgttgtagatatatcagatgaa
tcagatgattgcactgctaggaacgatggtgtacaaattttatctgaggaaatggaagac
actgcaacacagatggacatgacaaatataacagaggctggtgcaattgagaaggatgtg
ctgtatagagcggagaatgcaaatggccatgaaattgaggaagatgtcctatatcgagag
gagaatacagatccagacaattgggatctgggagatatcctaaaagaaatagagaagtgt
ggcaagagcatggatatagacattgcagagcaagtacaagaactaggaagcaacatagat
gtggcatcagttgcagaagaaacagatagcagtgaagaggaacaagatatatccaatgaa
tttgaaagtgaattgtctgataaagatctacgaaccttctgcagggattcttccaaagca
ttctttgacgagtggggactgattagccatcagctgaattcattcaaccatttcatgagt
catgggttgcagaaggtgtttgatgatcttggtatgtttgatgtagaaccggataataca
aaaaagagatcatcatcagacacgttacgttattgggcatccgttacttttggtaaggtc
actgtggagaagccttcctatagcaccagggaaggaaagaggctggcactgaaacctgct
gaggctcggctacgcaacatgacatattcatctcccatctatgtagaaattacaacaaag
gtttacattcaggaagggatgaaaacaaatgacaaatcaaaaagcagttcaagttcagta
atgaacgatgcaaaaaatctgacagttgttagtgaggaacggaaaagagtgtttgttgga
caaattcctatcatggtgaaatcgcatctttgctacttgagcagtctaacttgtaaggag
ttacttgaagaaggagtttgttcatttgaagttggagggtatttcattataaatgggact
gaaaaggtttttattgcacaagaagagcgatgcactaaccggatatgggtatcaaatact
ccaagctggatggcaatatacacaccttatacaactggattttccacttataagaagaaa
gtatttgtcaaaatcatcaagacatcaaaagatgataaatggtgtggtggaagacaagtg
atcacagttaatttcttgtcaattacagttccagttgtgattatgttttatgccctgggt
gttaaatcagatcttgagatgatgcagatgataggtaacgcatccaatgactatgacatg
agggagttattattgtcatcaatttacaaggcagaggcagagataagaaggtttcgaaga
aaaaataaagcttgggattattttaatgaacgattcgagaaatgcaaattgctgaaagtt
aaagatgctgaagaggcccttaaagaatactttttcccatacatagtgggctataaacaa
aaagccatgtttttaggatacatggtcaattgtctaatatcatcttattttggtcaaaga
catgttgaaaacaaagatgaatacaagaacaaaagagtggaactggcaggggagcttctg
ggccgtgaagtacagggcttggttagacatttccgtaatagattttctaaaggaattcag
agagaactctcagtacatggcaacattaattcaatggagatctatgctgatggttcaatc
attacaaatggtcttgtgagagcattttctacaggaaattggtgtcatcctaataaattc
cataccaaatgcactggtatagtggcaagcctgaagtcaacaaatccattgcagactatg
tctgagatgcgtagattgcgactgagggttcaatatgctgcaaaactaggggatgcaaga
tacccgggtggaaaattgccattaacagaaagttggaatcaaaaggcaagcaataatatg
agatttctgtcaccatactattaa

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