Cryptomeria japonica (Japanese cedar): 131046890
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Entry
131046890 CDS
T10556
Name
(RefSeq) protein OPAQUE1 isoform X1
KO
K10357
myosin V
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
131046890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131046890
04131 Membrane trafficking [BR:
cjf04131
]
131046890
03029 Mitochondrial biogenesis [BR:
cjf03029
]
131046890
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjf04812
]
131046890
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
131046890
mRNA cycle factors
P-body specific factors
131046890
Membrane trafficking [BR:
cjf04131
]
Others
Actin-binding proteins
Myosins
131046890
Mitochondrial biogenesis [BR:
cjf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
131046890
Cytoskeleton proteins [BR:
cjf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
131046890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Zeta_toxin
ABC_tran
Myosin_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
131046890
NCBI-ProteinID:
XP_057836688
LinkDB
All DBs
Position
2:633695147..633969252
Genome browser
AA seq
1569 aa
AA seq
DB search
MFKRKFHREDSEMTRNNGRQDDSGVFTKANIAIGSKVWVENNGVAWEEADVIEIDNGQAK
VLTARGLVFYTPIFKMHPRDPDAKHGGVDDMTKLAYLNEPGVLHNLARRYELNDIYTYTG
SILIAVNPFTKLPHLYNVHMMEQYRGATFGELSPHVFAVADVSYRAMINEGRSQSILVSG
ESGAGKTETTKLIMQYLAYIGGRAAMDGRTVEQQVLESNPLLEAFGNAKTVRNDNSRKYW
RGHYKEVHLFISRFGKFVEIQFDKNGRISGAAIRTYLLERSRVVQITHPERNYHCFYQLC
ASPEDVAKYKLGDPRLLHYLNQSNTYDLVGVSNAQEYNNTRRAMHIVGINLEEQESIFRV
LAGILHLGNIEFVSGKEHDSSILKDKKSAFHLQTAAELLMCDVETLQDVLCKRVIVTHDG
NIVKSLEPHVAAANRDALAKTVYSHLFDWLVDKINKSIGQDPDSKTQIGVLDIYGFESFQ
NNSFEQFCINLANEKLQQHFNQHVFKMEQDDYSKEEINWSYIEFIDNQDVLDLIEKKPIG
IIALLDESCMFPKSTSETFATKLFQNFGNNHRFKKPKLAQTDFTISHYAGEVTYQTDHFL
EKNRDYIVVEHNNLLSSSKCPFVASLFPSLPEHNIKSSYRFSSVATRFKQQLQALLETLN
CTEPHFIRCVKPNASNKPGNFDNQSVLHQLRCGGVLEAVRISCAGYPTRCTYDEFLDRFG
LLAPEIINRNYDEKTASQKLLQKLNLHNFQLGKTKVFLRAGQIVDLDVRRAHALNNAAKV
IQRFVRAFIARKEFIRTCDAVITIQTYCRGFLACKILELRRREIATTIIQKHTRRWLLER
KYMLLRSVAIVVQAGIRASFAHKEFNMKKQTVAATKIQRQWHMFKVQSYFCQLRKATIAF
QCAWRCRVATRELRRLKLSARETGALQEAKNKLDKRCEELTWRLELEKRLRVAAEESKRV
EVKKLLNAFQEMQEELNRANLKFIQEREKANVLQSKLETATRELSKLETTQVKFQELIKE
NENAKASVELIEKKQLETEREFIRTKKELEEWQKRADEAELKASRAKQDLQRSEERIASV
DHEKQVLRQQSIAISPNSGLKNVANPILIQKTPEFHQLSNGDQRSHFDSPMSSQIFREFS
RTPVESRRSRLILERQQENQEVLLKCVTENLGFTHHRPVAACIIYKCLLHWHTFEAERTT
MFDHLIQAILSEIEGQEDGNVLAYWLSNISTLLFLLQRNLRSNSFPTATQLRLNASVSYL
GRLTQSFRSPSNIASPGALASCGDNTSAWQVDAKYPALLFKQQLTAALEKVYGLIRDNAK
RELTPLLNFCIQAPRVSRVSMVKGSRSPNFGGSNHQALGSHWHNIIKILSSLLNTLCSNH
VPAFFISKLFTQVFSFINVQLFNSMLLRRECCSFSNGEYVKFGLSELEQWICEATEKYAG
KSWDELRFIRQAVGFLVIHQKRNKPLNELVNDICPGLSIQQLYRISTMYWDDKYGTQSVS
NEVIRNMIDIVKNDSHDMSNNSFLLDDDLSIPFSADDISNTIDDIDLSDVEPPPLLHEYP
TFQFLLQHS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaggaaatttcatagggaggatagcgagatgacgcgcaataatggacgccaa
gatgacagtggagtgtttaccaaagcgaatattgctattggatcaaaagtatgggttgaa
aataatggagttgcatgggaggaggctgatgtaattgaaattgataatggacaagctaaa
gttcttacagccagaggacttgtgttttatactcccattttcaaaatgcatcctagagat
ccagatgcaaaacatggaggagtggatgatatgactaaattggcctatttgaatgaaccg
ggtgttttgcacaaccttgcaagaagatatgagctcaatgatatatatacatatacagga
agtattttgattgctgtaaacccttttacaaagctaccacatctatataatgtccacatg
atggagcagtataggggagcaacatttggggagttaagtcctcatgtttttgcagttgct
gatgtttcttacagggcaatgataaatgaggggcgtagtcaatcaatactggtgagtggt
gagagtggagctggaaaaacagagacaacaaaactcataatgcagtatttagcttatatt
ggtggtcgggctgctatggatggcagaacagttgaacaacaggttcttgaatctaatcca
ctcttagaggcgtttgggaatgcgaagacagtacgcaatgacaattcgaggaaatattgg
aggggccattacaaagaggttcatctttttataagtcggtttggtaaatttgtggaaatc
caatttgacaaaaatggtagaatatctggagctgcaatcaggacttatcttctagagagg
tcccgtgttgtgcagataacacacccagagaggaattaccactgtttttatcaattatgt
gcttctccagaggatgtagcgaagtacaagttaggggatcctagactgctgcactatctg
aaccagagcaacacatatgacttggttggtgttagcaatgcccaagaatataataatacc
agaagggccatgcatatagtaggcataaatcttgaagaacaggaatcaatttttcgggtt
ctcgcaggaatattgcatttaggaaacattgagtttgtttcagggaaagaacatgattca
tcaattctaaaggacaagaaatctgcttttcaccttcaaactgcagcagaattattaatg
tgtgatgttgaaacattgcaagatgtactatgcaaacgcgttattgtgactcatgatgga
aatatagtaaaaagtcttgagcctcatgtggctgcagccaatcgagatgctttagcaaag
acggtttactctcatttatttgattggttggtggataaaattaataaatctattggacaa
gatcctgattcaaaaactcaaataggagtcttggacatctatggcttcgaaagttttcag
aacaatagctttgagcaattttgtatcaaccttgctaatgagaagcttcaacagcatttc
aaccagcatgtgttcaagatggagcaagatgattatagcaaagaagaaatcaattggagc
tatatagagttcatagataaccaagatgttttggatttaattgaaaagaaacctattgga
attattgcactattagatgaatcgtgtatgttcccaaaatctaccagcgaaacatttgca
accaagctttttcagaactttgggaataatcaccgattcaagaagccaaagctagcacag
acagactttacaatttcacattatgctggtgaggtgacatatcagacggatcatttccta
gagaaaaacagagactacattgttgtggagcacaacaatttgttgtcatcttcaaaatgc
cctttcgttgctagtctttttccttctttgcccgagcataatataaaatcttcttacaga
ttttcttctgttgctacacgattcaagcaacaactgcaagctctgttggagacacttaac
tgcaccgaaccacattttatacgttgcgtgaagcctaatgcgagtaacaagccagggaat
ttcgataatcaaagtgttctgcatcaacttcgctgtgggggtgttctcgaagcagtacgg
ataagctgtgctggttatccaacacgatgtacatatgacgaatttttagatcgctttgga
cttcttgcacctgagataattaatagaaactatgatgaaaaaactgcttctcaaaagttg
ctgcaaaagttgaatcttcacaatttccaattaggaaaaacaaaggttttccttagggct
gggcagatagtggatttagatgtccgaagagcacatgctctaaataatgcagcaaaagtt
attcaacgttttgtgcgtgccttcattgcacgtaaagagttcatcagaacatgtgatgct
gtcattaccattcaaacttattgccgtggttttcttgcttgcaaaattcttgaactaaga
cggagagaaattgcaactactattattcagaaacatactcgtaggtggttgcttgagagg
aagtacatgcttcttcggtctgttgccattgttgtccaggctggaattcgtgcatctttt
gctcacaaagaatttaatatgaaaaagcaaacagtagctgcaactaaaattcagagacaa
tggcatatgttcaaagttcaatcatatttttgtcaattgcgtaaggcaacaattgctttt
caatgtgcatggagatgcagggttgccacaagggaactacgtagactgaagttgtctgcg
agggaaacaggtgctctgcaagaagcaaagaataagcttgacaagaggtgtgaagaactc
acttggcgtttggagcttgaaaagagattaagggttgctgctgaagaatctaagagagtg
gaagtgaaaaagctgctgaatgcattccaggaaatgcaagaggaattaaatagagcaaat
ttaaagtttatacaggagagagaaaaagcaaatgtgcttcagagcaaacttgaaactgct
actagagaattatcaaagcttgagacaacccaggtcaaatttcaagaactgataaaagag
aatgagaatgctaaggcttcagtagaactaattgaaaagaaacaattagaaacagagaga
gagttcataagaactaaaaaggaacttgaggaatggcaaaaaagggcagatgaagctgag
ttgaaggcatctcgagcaaagcaggatctacagagatctgaagaaaggattgctagtgtc
gatcatgagaagcaagtgcttaggcaacaatctatagcgatttcaccaaacagtggcctt
aaaaatgttgcaaatcccattcttatccagaaaacccctgaatttcatcagctttcaaat
ggagatcagagatctcacttcgattcacccatgtcctctcagatttttagagagttcagt
cgcacaccagtggaatctagacgctctcggttaattttagaaagacagcaggaaaatcaa
gaagttcttctgaagtgtgtcactgaaaatttgggttttactcatcatagacctgttgcg
gcctgtatcatatataagtgccttcttcattggcatacatttgaggctgaaaggacaact
atgtttgatcatttgattcaggctattctctcagaaattgagggtcaagaggatggcaat
gtcttagcatactggctgtcaaatatttcaacactacttttcctcctccaacgaaattta
agatcaaatagctttcctacagcaacacagcttcgtctaaatgcttcggttagctatttg
ggaaggttgactcagagctttagatcaccatcaaatattgcttccccgggagctctggca
tcgtgtggtgataacacgagtgcatggcaagttgatgcaaagtatcctgctttgcttttc
aagcaacaattaactgcagctttggaaaaggtctatggtttgatccgtgataatgcaaaa
cgagaattaacaccgttgctcaatttttgcattcaggctccaagggtatctcgagtaagc
atggtgaaagggtctcgctcaccaaattttggtggatctaaccaccaggctttgggttct
cattggcataacattatcaagatcttgagctctttgttgaacacgctctgttctaaccat
gtacctgcattttttatcagtaaactattcacacaagttttctcattcatcaatgtacaa
ctttttaacagcatgctgttacgacgtgaatgttgctcttttagcaatggtgaatatgtt
aaatttgggctttctgagctggaacagtggatatgtgaagcaacagaaaaatatgcagga
aaatcatgggatgaattaagattcataagacaagctgttggtttcttggtgatccatcag
aaacgaaataagcctttaaatgaacttgtaaatgatatatgtccgggtctgagcattcag
cagctataccgcataagcacaatgtattgggatgacaagtatggcacacagagtgtatca
aacgaggttataagaaacatgatagatattgtgaaaaatgattctcatgacatgtcaaac
aattcttttctgttggatgatgatttaagcatcccattttctgctgatgatatatcaaac
actattgatgacatagacctgtctgatgttgaaccaccgccgttgcttcatgaataccca
acttttcagtttctgctacagcattcatga
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integrated database retrieval system
