Cryptomeria japonica (Japanese cedar): 131046894
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Entry
131046894 CDS
T10556
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
131046894
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131046894
NCBI-ProteinID:
XP_057836706
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Position
2:634515035..634673477
Genome browser
AA seq
2069 aa
AA seq
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MAQQSSRLQRLLTLLDTGTTQTTRLTAARQIGEIAKLHPQDLNILLKKVSQYLRSKKWDT
RVAAAQAIGAIAENIKSVSVNDIRADTESELLKLGIAENVKDLTIVSWNPAQNCSTLLSF
GRFDINKVLEFGAPLLASGGQEYDIAIDNSKSTAERLARQKENLTHRLGLDMYGYMDVNE
MIRDEDLVMHKVPTQGNGSQHIYCTSQSSGQQIQKLVTNMGQGIRHRPLSARERNSLKRK
AKVNVKDHSKGWCDDDNLEEAVSKNKVTAKSVAVDQPQKCNKITETPVDEDCLEQVGDGR
WPFMYFVEQLFHDIFDPVWEIRHGSIMALREILSYQAASAGVFLPDLNTKGAWYTDLEEG
KKNNPLKREREIEIDLNVGLNLEDYMSEAKRIKIEHHSAEFLTEIDPEKELKPGILVKQE
NGTWNSNTADTPCEINLVSAKPELDLNEDVGPASASEREGISLQKHKNMHIDSGFISKLP
EDSRALKMLRLAQHVSAKNWEFLQDCAIRFLCVLSLDRFGDYVADQVVAPVRETCAQALG
AVLKHMHPSMVYGTLNTLLQMQHRQEWEVRHGSLLGIKYLVAIRQEMLQELLSGVLPAID
VGLEDRDDDVRAVAAEALTPAASAIVSFAGQTVNRILMQLWDILLDLDDLSPSTSSVMHL
LAELYSQPEVVPKTLEALLPVQRQIFDLNEAVGVDDHADSTMADDNPYLLSSLAPRLWPF
MRHSISSVRHAAIRTLERLLEAGSKGNSPTCRMQNFWPIPILGDALRIVFQNMLLESNEA
IVKCSEKVWRLLLQCPHEELAAAADCYFASWLKLSTTPSGCLLDASKMFSPTSLPRRSQF
KAAAKLRASKGESLNLGHVAITTEKELPTHDKSLDISSNFTKIYVGADGEQSVTCMRVVT
ASALGVLAANLPEALFQKLVDSLLEHLASLSAVQRQVASVVLVSWFKELGVCTSKERMAC
AVNAVNSIRQRLLDLLDGGDSFMPTCDLSLPYAELSRTYSKMRSEAAALIRIASTSGFFQ
NIFSTGIPPADELSIDAAVDLATKVLVSKDAFSEDGREKQAFESLEAARQRLLATAGYLK
CVQGNLHISVTALMSGAVVWMVELPAKLNPVIKPLMSALKREQEEVLQRMAAEAVAEIIS
QCVGRRPSPNDKLIKNICALTCTDPSETPQATQMNANELNLEEDSVLMGKGAGNQHSKSQ
TSSVGEERSRAEGFISRRGAEIALKSLCDKFQNSLFERLPRLWECLTEVFKPSVPDGLEL
LEALQNMQMMEFNEEPQVLINNLQVLRSIAPLLVQPLQFKLLTLLPGIFGCVRHWHVAVR
LVASRCITSMAKTLLVNVMGAVMEKAIPMLRDSSSVQARQGAGMLITLLVEDLGVKLVAY
APLLVVPLLGCMSDSDPNVRQSVTRSFAALVPLLPLARGVPSPTGLSQKLSSRTAEDAHF
LEQLLDNSQVDDYKLAVELKVTLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASA
IVASDFVERVASKVDKDQLHSLIVCPSTLVGHWAFEIEKFIDTSVLNPLQYVGSPQERSL
LRNQFTEYNTVITSYDVVRKDIDFLGSLVWNYCILDEGHIIKNARSKITTAVKQLKAEHR
LILSGTPIQNNVLELWSLFDFLMPGFLGAERQFQSTYGKPILAARDVKRSAKDAEAGALA
MEALHKQVMPFLLRRTKDEVLADLPEKIIQDRYCDLSPVQLRLYEHFSRSEAKKEISTLV
EAYGSSGADDEPTTTSKASSHVFQALQYLLKLCSHPLLVIGDAPSDSLVSKLSECIPDSK
DIRTSLHDLQHAPKLVALQEILEECGIGTENGIGMESSGSEDAAVAEGSQHRVLIFAQHK
AFLDIIEKDLFQTRMKSVTYMRLDGSVEPSKRFDIVKTFNSDPTIDVLLLTTHVGGLGLN
LTSADTVVFVEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSV
ANAVINAENASLNSMDTTQLLDLFTTSALSGKVASSSKNLENDETSNNVNAIGAGKGLKS
VLNGLDVLWDQSQYTEEYNVGQFVARLNS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagtcgtctcgtcttcaacgtctgctcacacttcttgacactggtactacg
cagacaactaggcttacggctgcacggcagataggagaaattgcaaagctgcatccccag
gatcttaatatactcttgaagaaggtttctcagtatcttcgaagcaagaaatgggatacc
agggttgctgctgctcaggctattggtgccatcgcagaaaatattaaatctgtatctgtg
aatgacattagagctgatactgaatctgagttgttgaagttgggaattgctgagaatgtt
aaagacctaactatagtaagttggaatccagcacaaaattgctcgacacttctttctttt
ggcagatttgacattaataaagttctagaatttggagctccgttgcttgcatcaggagga
caggaatatgatattgcaatagataatagtaagagtacagctgagcggttggctcgacag
aaagaaaatctaacccaccgattaggattagatatgtatggctatatggatgttaatgag
atgatacgggatgaggatcttgttatgcataaggtgccaacccagggaaatggatcacag
catatatactgcacatctcaatccagtggccagcaaattcaaaaacttgttacaaacatg
ggtcaaggaattcgtcatagaccactaagtgcaagggagcgcaattcactgaaacggaaa
gccaaggttaatgttaaagaccattcgaaaggttggtgtgatgatgacaatcttgaggaa
gcagtttcaaagaacaaagtcactgcaaaatctgtagctgtggaccagccacaaaaatgt
aacaagataacagagacaccagttgatgaagactgtttggaacaagttggtgatgggaga
tggccatttatgtactttgtagagcagctctttcatgatatatttgatcctgtttgggag
atacgtcatggaagcattatggctttgagagaaattctaagttaccaagcagcatctgct
ggagtgttcttgcctgatttaaacacaaaaggtgcctggtatactgacctggaagagggc
aagaagaacaatcccctaaaaagggagcgggaaatcgaaattgatttgaatgttggttta
aatttagaggattacatgtcagaggcaaaaagaataaaaattgaacatcactcagctgaa
tttttgacagaaattgatcctgagaaggaactgaaacctgggatacttgtgaaacaagaa
aatggcacgtggaattcaaacaccgctgatactccttgtgaaataaacttggtttctgct
aagccagagttagatttaaatgaagatgtaggacctgcatctgcctctgaaagggaagga
atttctcttcagaaacataagaatatgcatatagattcgggatttatatcaaaattacct
gaagacagcagggcactgaagatgttaagattagcacagcatgtatcagcaaaaaattgg
gaatttcttcaggactgtgctattcgatttctttgtgtattatctttggaccgttttgga
gattatgttgcggatcaggttgtggctcctgtacgagagacttgtgcccaggctcttggt
gctgtgcttaagcatatgcatccttccatggtctatgggaccttgaatactcttcttcaa
atgcagcatcgtcaagaatgggaagttcggcatgggagcctcttaggtatcaagtatttg
gttgcaattcgccaggaaatgcttcaagaattgctttctggtgttcttcctgcaattgat
gttggcttggaagatcgagatgatgatgtaagagcagttgcagccgaggccttgacacct
gctgcatcagctattgtttcctttgctggccagacggtgaatagaattcttatgcaactg
tgggatattctgcttgatttggatgatctaagcccctccactagcagtgttatgcattta
ctggcagagctctattctcagccagaagtggtgccaaaaacattagaagccttgcttcca
gtgcagagacagatttttgatttgaatgaagcagttggggttgatgaccatgcagatagc
acaatggctgatgacaatccatacttgctatcaagtttagctcctcgcttatggccattt
atgaggcacagcatttcatcagttcgtcatgctgcaatacgaactttggagcgacttttg
gaggctggaagtaaagggaattcccccacgtgtagaatgcagaatttctggccaattcct
atcctgggtgatgcattaagaattgtattccagaatatgcttttggaatccaatgaagcg
attgttaagtgttcggagaaggtttggcgtcttttgcttcagtgcccacacgaggagcta
gcagctgctgcagactgttattttgcttcatggttaaagctttcaacaaccccctctggc
tgccttttggatgcatcaaaaatgttttcacccacctctcttccaaggaggagtcagttt
aaggctgctgcaaagttgagagcttccaaaggagaaagtctaaaccttggacatgttgct
ataactactgagaaagaacttcctacacatgacaaaagtttagacatctcttcaaatttc
acaaagatatatgttggtgcagatggtgaacaatcagtgacttgtatgagagttgttact
gcatcagcattgggggtccttgcagccaatttaccagaggcactatttcagaaacttgtt
gattcattgctggagcatttagcatcgttatctgctgtccagcggcaggttgcatctgtt
gttcttgtatcatggtttaaagagcttggtgtatgtacctcaaaggaaagaatggcttgt
gcagttaatgctgtcaattctattcggcaaagacttttagacttgctggatggcggtgat
tcttttatgcctacttgtgatctctccttaccatatgcagagctttctcggacctattca
aaaatgagatctgaggctgctgcattaatccgaattgccagtacttcaggattctttcaa
aacatattttctacaggaattcctccagcagatgagttaagtatagatgctgcagtagat
ctggcgacaaaggttctggtgtcaaaggatgctttttctgaagatgggagagagaagcaa
gcctttgagagtttggaggcagcaagacaacggcttttggccactgcgggatatttgaaa
tgtgttcagggcaatttgcatattagtgttaccgctttaatgtcaggtgcagtcgtttgg
atggtagagctacccgctaagctaaatccagtcataaaacctcttatgtctgctttgaaa
agagaacaggaggaagtcttacaaaggatggcggctgaagcagtagcagaaatcatttca
cagtgtgttggacgtaggcccagtccaaatgataagctgatcaagaatatatgtgcattg
acctgtacagatccaagtgaaactcctcaggcaacacagatgaatgcaaatgagttaaat
ttagaggaggactcagttttgatggggaaaggtgctggcaatcaacattcaaagtcacaa
acttcttctgttggtgaggaaagatctagggctgaaggttttatcagcagacgtggggca
gaaattgctttgaagtccctatgtgacaagtttcaaaattcactatttgaaaggcttcct
aggctttgggaatgtctcacagaagtttttaagccaagtgtacctgatggtttggagctg
ttagaggctttacaaaacatgcaaatgatggagttcaatgaagagcctcaagtcttgata
aacaatcttcaggttttgcgttcgattgcacctctgctggtacagcctttacaattcaaa
ttgttaacactactacctggcatctttggctgtgtacgtcactggcatgttgctgttaga
ttggtggcttcaagatgcattacatctatggcaaaaacattattggtcaatgtgatggga
gcagtgatggaaaaggccatccctatgctgagggattcatcatctgttcaggcaaggcaa
ggagcaggcatgcttattactctattagttgaggatttgggagtgaagctggtagcatat
gctccccttcttgttgttccacttttgggctgtatgagtgacagtgatcccaatgtaagg
cagagtgtaactcggagctttgctgctttagttcctcttctgccacttgctaggggtgtt
ccatcaccaactggactcagtcaaaagctatcctcgagaactgccgaggatgctcacttt
ctggagcaacttcttgataattcacaagttgatgactataaacttgctgtagagttgaaa
gtgacccttagaaggtaccaacaagaaggtatcaactggctaggatttctcaagcgtttt
aagcttcatgggattctgtgtgatgacatgggtcttggtaaaacactccaagcatcagca
atagtagcatctgattttgtggaacgtgtggcttccaaagtagataaagatcagttgcac
tcattaattgtgtgcccatcaacattggtgggtcattgggcctttgaaattgagaaattt
attgatacctccgttttaaatcctctgcaatacgttggatctcctcaagagcgctctttg
cttcgaaatcaatttacagaatataatactgttataacatcatatgatgttgttcgcaaa
gacattgatttcttggggtctcttgtctggaattactgtattttagatgaaggtcacatc
ataaagaatgcaagatcaaaaattactactgcagtcaaacagttgaaggctgaacaccgt
cttattctgagtggaacaccaattcagaacaatgtcttggagctctggtcactttttgac
tttcttatgccaggtttccttggagcagagagacagtttcagtccacttatgggaaacca
atattggctgcaagagatgtgaagcgttcagccaaggatgcagaagctggtgcccttgcc
atggaagcactacacaaacaggtcatgccttttcttcttcgacgaacaaaagatgaagta
ttagctgatctgccagaaaaaataattcaggaccggtattgtgatttgagtcctgtacag
ctgagactttatgaacacttttctaggtcagaagctaaaaaggaaatatctaccttggtt
gaggcttatgggtcatcaggtgcagatgacgagcctaccaccacatcaaaggcatcttcc
catgtcttccaggctttgcaatacttgcttaaattgtgcagccatccattgcttgtaata
ggagatgcaccatctgattctcttgtgtcaaagctatctgagtgcattcctgatagtaaa
gatatcagaacaagcttgcatgatctgcagcatgctccaaaattggttgctcttcaggaa
atacttgaagaatgtggaataggcacagagaatggaataggtatggaaagctcaggtagc
gaagatgcagctgttgcagaaggcagtcagcacagggtccttatttttgctcagcacaaa
gcatttttggacataattgagaaggacctgtttcaaactcgtatgaaaagtgtgacatac
atgcgtctggatggttctgttgagccgtcgaaacggtttgatattgtaaaaacattcaat
tcagatccaactattgatgttcttctactgacaacacatgttgggggacttggtttgaat
ctaacatctgcagacactgtggtttttgtggagcatgactggaatccaatgcgagatcat
caggccatggatagagctcatagactgggacagcgcaaggtggtgaatgttcacaggctt
attatgcgaggaacattggaagagaaagtcatgagtcttcagaagttcaaggtctcagtt
gctaatgcagtcataaatgctgagaatgctagtctgaattcaatggatacaactcagtta
cttgacctgtttactacatctgcattgtctgggaaggtggcttcatcttcaaagaatctg
gaaaatgatgaaacatcaaacaatgtaaatgctataggtgcgggcaaaggcctgaagtca
gtgcttaatggcttggacgtgctctgggaccaatcacagtataccgaagaatacaatgtt
gggcagtttgtagcgaggctcaacagctga
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integrated database retrieval system
