Cryptomeria japonica (Japanese cedar): 131047032
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Entry
131047032 CDS
T10556
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjf04040
]
131047032
Ion channels [BR:
cjf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131047032
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
131047032
NCBI-ProteinID:
XP_057836809
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Position
7:860892408..861261853
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AA seq
733 aa
AA seq
DB search
MGSISQRVVGQKEKTVSFYVDSESKEPFGSGRGKFNKYGLRHRNSDRISSSMSWSVRRVM
EKRSQEVKNIGHSLRIGVSRVVFPEDLKLSEKRLFDPQDKVLQRWNKFFIISCIVAVFVD
PLFFYLPLVDNELNCLDIDKNLALVVTILRSLIDIFYIIHMALQFRTAFTSPSSMVFGRG
ELVMDPIQIAKKYLSTYFIIDFLAVLPLPQVIIWIFVPKLTGSNALYTKNALRFIIFLQY
LPRFFRMFPLNAEVVRTSGRFNQTAWAGAVYNLLLFVLASHVVGACWYLFALDRMVTCWK
EACEPDNSCILDYVYCGNKYDDGFNIWRETGLQELSSNCTVNSDGTSSFNYGIYNFGLRL
GVVASRKFVQKYFFCLFWGLQQLSTLCQGLSPTQYFGEEIFSISIIVLGLILMALLIGNM
QTYLQSLTIRLEEMRLKRTDTEQWMHRRSLPEDLRQRVRLHGQHKWIETRGVDEEHLIQN
LPKDLRRDIKRHLCLDLVKQVHLFKNMDDCLLDAICERLKTSLYTEDACIVREGEYIDEM
LFIIQGQIESVTTNGGRIGFFNHVVLKQGDFCGEELLTWALDPKSGASLPSSTRTVKALS
EVEVFSLRAEDLKFVATQFRRLHSKQVQHTFRFHSQHWRTWAACFIQATWRSHCRRKHAE
YLLSKQYKLPSAMVVDNSTVSPNFKAAFYASYFATDALHGMHRNRNMKLSEQPTQLVELQ
KPPEPDFSAEDYE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggggagtatatctcaacgtgtggttggtcaaaaggaaaagactgtaagtttttatgtt
gattcagagtccaaggaaccttttggatcagggaggggcaaatttaataaatatggctta
agacatagaaactcagacaggatatcaagctctatgtcatggtctgtaagaagagtaatg
gagaaaagatcacaagaagtgaagaatattggtcattcattgcgaattggagtttccaga
gtagtctttccagaggatcttaagctgtctgagaagaggttatttgatccacaagataag
gttcttcagaggtggaacaaattttttattatatcgtgcatagttgcagtatttgttgat
cccctgttcttttatctgccacttgtggataatgaattaaactgccttgatatagataag
aatttggcattggttgttactattctgcggtctctgatagatatcttttatataatacac
atggccctccagttccgaacagctttcacatccccttcatctatggtatttgggagagga
gagcttgtgatggatccaatacaaattgcaaaaaaatacttgtcaacatacttcattatt
gactttcttgctgtgttgcctcttcctcaggtcattatctggatatttgttccaaaattg
acaggttcaaatgcattgtatacaaagaatgctttacgatttatcatctttcttcagtat
ttgccaagattcttccgtatgtttccacttaatgcagaggttgtaaggaccagtggacga
ttcaatcaaacagcctgggcaggggctgtttacaatttacttctgtttgttcttgcaagt
catgtggtcggagcttgctggtatttatttgcactggatcggatggttacgtgttggaaa
gaagcatgcgaacctgataatagttgtattctggactatgtctactgtggaaataaatat
gatgatggtttcaacatttggcgtgagactggcctgcaagagctcagttctaattgtact
gtgaatagtgatggtacatcatcatttaattatggaatatacaattttggtcttcgttta
ggggttgttgcatcaaggaagtttgtacagaaatatttcttctgcttattctggggcctc
caacaactaagcacactttgccagggtttgtcacccacccagtattttggagaagaaatt
ttctcaatatccattatagttcttgggttaatattaatggcacttcttatcggcaacatg
cagacctatttgcaatctttgacaatcaggctggaagaaatgagattaaagaggactgat
acagaacaatggatgcaccgtcggtctctccctgaagatcttaggcagcgtgttcgtcta
catggccagcacaaatggattgaaaccagaggagttgatgaagagcatttaattcagaac
cttccaaaagatctcaggcgtgacatcaagcggcatctgtgtttagatttggtcaaacag
gtacatttgtttaagaatatggatgattgtttattggatgcaatttgtgagcgtcttaaa
acatccctttatactgaagatgcatgcattgtaagagaaggagaatacatagatgagatg
ctttttatcattcaaggccaaatagaaagtgtgacaacaaatggaggaagaattggattt
ttcaatcatgttgttctgaaacaaggagatttctgtggggaggaactactgacatgggct
ttagatccaaagtctggtgcaagccttccatcatcaacgagaacagtgaaagctttgtca
gaggtagaggtattctccttaagagcagaagatttaaaatttgttgcaacccagttccgg
cgcctgcacagcaaacaggttcaacatacctttcgcttccactcccaacattggagaaca
tgggctgcttgtttcattcaagcaacctggcgcagtcactgcagaaggaagcatgctgaa
tatcttctcagcaaacagtacaaattgccaagtgctatggtagtggacaattctactgtt
tcccccaactttaaagcagctttttatgcatcctactttgccacagatgctcttcatggc
atgcacagaaatcgtaacatgaagttatcagaacaaccaacacaactagttgaactacaa
aaacccccagagcctgatttcagtgctgaagattatgaataa
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