Cryptomeria japonica (Japanese cedar): 131047130
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Entry
131047130 CDS
T10556
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131047130
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131047130
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Helicases
131047130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
131047130
NCBI-ProteinID:
XP_057836960
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All DBs
Position
3:complement(852108141..852200343)
Genome browser
AA seq
799 aa
AA seq
DB search
MGFFKKTINKKIKMGKETKDSTDAQIRKKKNIRKKPEGLIGPSSLWRSSVDDPFSVLLGS
TEGGFLSLEEIDEDLYNLGQKDTPQPEKTGSSLKKRKRVTEKVDERSESLLSQKDDSMQG
LASKSAKKKKKKKKKKKKMKNKKKKKDTIESKSEKVHLSEEDRDVDNANTGISGVPDDIN
AKDCEGDLSFDVEEFSAWNELRLHPLLKRAIWALQFKEPTPIQKLCIPAAAHQGKDVIGA
AETGSGKTLAFGLPILQRLLEEQEKAARKEGFAINGQTFTGEERGAPLRALIVTPTRELA
LQVCDHLRAAAKFTNIRVVPIVGGLAPQKQERLLKKRPHIIVGTPGRLWELMAGGERHLV
ELQSLSFFVLDEADRMIEKGHFHELQSIIDMLPQVSDHSVEPRSSDGAQPLENASGDEVK
QSFKRKRRQTFVFSATIALTSGFRKKLSKGGLHKIKPGTMDENDSLAALSERAGVRQNAA
VVDLTSSSIMAHNLEESVIECREEDKDVYLYYILKVHGCGRTIVFCTSIAALRRISALLR
ILNVTAWPLHAQMQQRARLKAMDRFKENENCVLVATDVAARGLDIPGVRTVIHYQLPHSA
EVYVHRSGRTARAATDGCSIALIAPNERSKYIALCRSFSKDGLQVFPVNSLYMPEVEKRL
SIARQIDRILRKHSQSKAQNNWYIRNAEALEIDIENNEKDKEEPRISKSTKAELFQAKQL
QKELDQLLTCPLQPRSLSRRFVTGAGMSTLLQQQLQELTSNKAPSNYKMSNGSKKHRLLV
IGEEAIEPLMALRNSKNVI
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgggttttttcaagaagacaataaataagaagataaaaatggggaaagaaacaaaggat
tcaacagacgctcaaatcagaaagaagaaaaatattagaaaaaaaccagagggtttgata
ggccccagttcgctatggaggtcaagtgtagacgatcctttcagtgttttacttggaagt
acagaaggaggttttttatccttggaagaaatagatgaagatttatacaatttgggtcaa
aaagacactcctcagcctgagaaaactggttcttcattaaagaagcggaaacgtgtaacg
gaaaaagttgacgagaggagtgagtcattactctctcagaaagatgactcgatgcaaggg
ttggcatcaaagtctgcaaagaagaagaagaagaagaagaagaagaagaagaagatgaag
aataagaaaaagaagaaagacacaatagaaagcaaaagtgagaaggtacatctttcagag
gaagaccgtgatgtagataatgctaatacaggcatatcaggagtgccagatgatataaat
gcaaaagattgtgaaggtgatttgtcatttgatgtggaggaattttcagcatggaatgaa
ttgagactccatcctttgctcaaaagagcaatctgggcattgcaattcaaggagcctacg
cccatacagaaactttgcataccagcagctgctcatcagggaaaggatgtgataggtgca
gctgaaaccggatcaggaaaaacccttgcctttggactgccaattttgcagcgccttttg
gaagagcaagagaaagcagcacgcaaggaaggttttgcaattaatggacaaacattcaca
ggagaagagaggggagctcctctcagagctcttattgtgaccccaaccagagaacttgca
ttgcaggtctgtgatcatcttagagcagctgccaagttcactaacataagggtggtgcct
attgtgggtggattagctcctcaaaagcaagagcgtcttttaaagaaaagaccacacatt
attgtggggactccagggcgattatgggaacttatggctggtggggaaagacacctagtt
gagctacagtctctttctttctttgtcctcgatgaggctgaccggatgatagagaaaggc
cactttcatgagcttcaatccataattgacatgcttccacaagtctcagatcattctgta
gaacctcggagctcagacggggcacaacctctggaaaatgcttcaggagatgaggtgaaa
cagagtttcaaaagaaaaagaaggcagacatttgtgttttcagccactatagcgcttact
tctggctttcgaaagaagctttcaaagggaggcctgcataaaataaagccaggtactatg
gatgaaaatgactcccttgcggcactttctgagagagcaggtgtgaggcaaaatgcagct
gttgttgatttaacatcatcaagcattatggcacataatctggaagagtcagtaatagag
tgtagagaagaagacaaagatgtgtatttgtattatattctgaaggttcatgggtgtgga
cgtaccattgtcttctgcacttcaattgcagcattgcgacgtatatctgcactattacga
atcctaaatgttactgcgtggcctcttcatgcacaaatgcagcagagagctcgtttgaag
gccatggatcgtttcaaggaaaatgagaactgtgttcttgtggcgactgatgttgcagca
agaggtcttgatattcctggtgttagaacagtcattcactatcaactaccacattctgca
gaggtctatgttcataggagtgggaggacagccagggctgctactgatggatgcagtatt
gcacttattgctcctaatgaaagatcaaaatatattgccctttgccgttctttttcaaag
gatgggcttcaagtgtttcctgtaaatagcttatacatgccagaagttgaaaagcgcttg
tctattgctcgacaaatagatcgcattttgcgtaagcattctcagagcaaagcacaaaac
aattggtatatccgaaatgctgaagccttagagatagacatagagaataatgagaaagac
aaggaggaacctagaatttccaagtctacaaaagccgagttatttcaagcaaagcaacta
cagaaggagttagatcaacttctaacatgcccactccaaccaaggtcattatcccgtcga
tttgtcacaggggctggtatgtccacacttcttcagcaacagttgcaggaattgacttca
aataaagcaccttctaactataaaatgtcaaatggaagcaagaagcataggcttcttgtt
attggtgaggaggcaatcgaacctcttatggcacttagaaattcaaagaatgtgatatga
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