Cryptomeria japonica (Japanese cedar): 131047154
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Entry
131047154 CDS
T10556
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131047154
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
131047154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
131047154
NCBI-ProteinID:
XP_057836995
LinkDB
All DBs
Position
4:368182988..368354797
Genome browser
AA seq
2065 aa
AA seq
DB search
MWTNIFRIGGLQQVSWFQFLPSETDIGTLRDKSGKIEDRKDAATFLVLSAHAHLQNEDSL
STWTNSFVGPWDPSQGIHNPDEKIKLWLFLPGRQSNIGASAQAAVSGLKVVGAGLWSAPG
DSEEVAVALSQALRNRIERAFRGLNYMRFGDVFVKCQSFGQDKFSFRKPLLTCELIFSAS
EEAIFVHVVVSAKRVQTLSSDDMEGVLRQHSRSNGAEERIAVFVAPHGMRGRLTGCCPGD
LVRQLYQSKMKASNDFSVNSLPFHFSQCSHEKIRGQNCYAEVSLGCVVGRAGRPTQVLSN
MNKNGTKQDDIDIQSCNMLMEDERKQACEDNVQLGERTFIYPVEAVLVPMMPIVLARTFL
RRCWLRDWAGTSWLENSLLADMSCTSSSISGSTFCINDGKESLESSWIGSNGLHQQNSTN
SNSSSSSSSSSTSSTTSSSESDIEPGIVSGDLEADADSLASKQSHLTSAVQMDMDGSKLL
HGGKRGRSSGADLISEAATAKSARKGDSAGPDVSGLVGEKSVTGMLKSGGTLTELNAVGI
SSTTAAASRSPWDWPDDDRSMGMEIQTVLAEFGDFGDFFEDDTLAFGEPPGTAESFMLSL
ADCGDGVGSPDVRGLETSDQMLLPVLDFSSLDGFSQDIELVKEDAEKDSYKDARSSQAGS
QSSGLSLGEVDSLPKAEAMMMFAPEYTPVETTRSELTSSLFRSPYIPDSRKERNIQSSSN
GYVYSATPPPSPCIESSDQKPEYGGKGNGTCKIRNDTDIQHELKKHYRHVQSGKLLYEKP
SSTNNSSVVQKRDLAFPSISQLVSTKLGMSVQLKCENDLGAGGLLMGPRTVLATEIECAM
LQAAMCRIRHVLMSSNNIVRLSSNRLTVGTSLDRPPNASHFHESNIPSGKVSVKQMKESI
PVRIAGDADEEMHDGPRTALVGVWRPVGAPKASKAYLLPKNENVKPSPYNVSEEESVVSN
TLKQPLHELLDAMSFLVQQATASTDISLDGECGDGPFAWLAFQEQQRRRFSCGPAMVHAG
CGGSLATCHFLDGSGVELIDPLVADVSPAAVLSLLQSDVRAVIKKAFEDSSSDGPLSIID
WCKGRVQLGEGGHAGDSSSGDCALNDSKEATSTIGDPITPPQCSAVGSVNLKGTGLQQID
NQISEVQRGSKNWGIETLSMSEGMRLDDSSQRRTALDAEGDLQMGLSRNRPTLMALSVPA
LLVGYQDDWLKTSTSPIQLWEKAPLEPYAPPKPVAYYVICPNIDLLLSESADFFQQLSTV
YEACKLGSHDPVNTEGQRFNSGKWASSGVVPVECPAQFQKTVNNLSFIGSINDYLMTLEK
GWDVSSFCRSLAKVLKSFPIGANSPGTQKDTDNGPFTVLYVICPFAEPGPMLQTIVEACR
CLGAIVNHPDKERRSITYSHVGKSLHCATTLDETLNLNVPTLFGFSVPKLVLQVLTAETI
LKATCPPVSELVTLKEIAFTVYNKARRIPRYAPVCDTLQAATPSLRARPGAVHMSPSVTG
FWKDCSINRATGASSLSRENALDTSCLRPGAWDSSWQTRHSESTTCDLSGSGDSISQNDV
CYLFEPLFILSEPGSLSQGVSLHVTGTATSDSLRTLSDDASGSTQPSTASVLGDIGSSIV
IDGSESDCLRAGNHRAPSLHCCYGWTEDWQWLICVWTDARGELLDVHIFPFGGIGSRQDT
KGLESLFIQVLQQGCQLLSVAPDVGGGRPRSLVIARIGCFYELECQEWQKAISAVGGDEM
KKWPVQLRRFAPDGTSASSGGSTIQPQEINMIHDRTLPPSPSTASSIYGSHSKTSNFIKG
NVGQPNTRKQVISGHSQEFSKGAFHWVQNISLVGLCIDHSLQLLSQVEATSLGGNQGASS
GISGSIDGLNPVNPHVSTTVSNLFVPSHNLRFFPPMPLQLPTCLTSESPPLVHLLHSKGF
AFPFATGFVVSKTTPSIRKDSMQRFTKEEWPSTLMVNLVDYYGGTNTIPTSQQVPITAEA
IGKSKQSRIPIIEAKDYQVEAHLALECVAAELHALSWLSVSPAFLDRRTALPLHCDMVQR
LRRLIHYASKEFGLSGMQERMQSVL
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtggactaacatctttagaattggaggtctacaacaagtctcatggttccagtttctg
ccttcagagacagacattggcactttgagagacaaaagtggaaagatagaggaccgaaaa
gatgctgctacttttctggttctttcagcacatgcccatttgcaaaatgaggattcttta
agcacatggactaactcatttgtggggccatgggacccttctcaaggtatccacaaccca
gatgagaaaattaaactttggctcttcctgcctggacgccaatcaaatatcggtgcatct
gcacaggctgctgtgagcggtcttaaagtggttggagctgggctatggtctgctccaggt
gattctgaagaggtggcagttgccctttcccaagcattaagaaaccgcattgaaagagca
tttagaggactcaattacatgagatttggagatgtatttgttaaatgccaatcctttggg
caggataaattcagcttcaggaagccacttttgacttgtgagcttatattttcagctagt
gaggaagctatttttgttcatgttgttgtttctgccaagagagttcagacactttcaagt
gatgacatggaaggggtcttaagacagcattctcgttcgaatggggcagaagaaaggatt
gctgtttttgttgctccccatggtatgcgcgggaggctcacaggttgctgtcctggtgat
ttagtgaggcaactttatcaaagcaaaatgaaagcctcaaatgatttctcagtaaatagt
ctgcctttccatttcagtcaatgttcacatgaaaagataagaggacaaaattgctatgca
gaggtcagtcttggttgcgttgtaggtagggctggcaggccaacacaagtactttcaaat
atgaacaagaatggcactaagcaggatgacatagacattcaatcttgtaatatgctgatg
gaggatgaaaggaagcaggcatgtgaagataatgttcaacttggtgaaaggacgtttata
tacccagttgaggctgttcttgttccaatgatgcccattgtacttgccagaacttttctt
agaagatgctggttaagagattgggctggtacatcatggttggagaacagtctgttagct
gacatgtcatgcacaagttcatcaatatctgggtcaaccttttgtattaatgatggcaag
gaatccttggagagttcatggattgggtcaaatggtttgcaccagcaaaatagtactaat
agcaatagcagcagtagcagcagcagcagcagtactagcagtactaccagctctagtgag
agtgatattgagccaggcattgtctcaggagatcttgaagctgatgctgattctcttgca
tctaaacagtctcatttgacttcagctgttcaaatggatatggatggctctaaattatta
catggtggaaaacgtggacggtcaagtggggcagacttaatcagtgaagcagcaacagct
aaaagtgcacggaagggagatagtgctggaccagatgtatcaggacttgtaggggaaaaa
tctgtcactggtatgttgaaatcaggaggcactctcacagaactgaatgctgtgggtata
tcatccaccactgctgcagcttctagaagcccttgggactggcctgatgatgatagaagc
atggggatggagattcagaccgttcttgcagaattcggtgattttggtgatttctttgaa
gacgatacattggcctttggggagcctccaggaactgctgagtcttttatgctatctcta
gcggattgtggagatggagtaggcagcccagatgttagaggattggaaacatcggatcaa
atgctcctacctgttttagatttttcatctttggacggttttagtcaggatatagaactg
gtcaaagaggatgctgaaaaagactcatacaaagatgctagatcatcacaagcagggagt
cagtcttcaggtctttcactgggagaagttgattcactgccaaaagctgaagctatgatg
atgtttgctcctgagtatacaccagttgagactacaagaagtgaactcacatcatctcta
tttagaagcccgtatattccagattcaagaaaagaacgaaatattcagtcaagctctaat
ggctatgtctacagtgctacaccgccaccttctccatgtatagaaagttctgaccaaaaa
cctgaatatggtggcaaaggaaatggtacttgtaaaataaggaatgacacagacatccaa
catgagttgaaaaagcattacagacacgtgcagtctggaaagctattgtatgagaagcca
tcgagtactaataattcttctgtggttcaaaagagggatttggcatttccgtctatctcc
caattggtttccacaaaacttggaatgtctgtccagttgaaatgtgaaaatgacctaggt
gcaggaggcctattaatgggtcccagaacagtattggccactgaaattgaatgtgcaatg
ttacaagctgctatgtgccgaattcggcatgtgcttatgtcaagcaataatatagttcgt
ctcagttcaaaccgattaacagttgggacatcactggaccgaccacccaatgcatcacat
ttccatgaatcaaacataccatctggaaaggtttctgtcaaacaaatgaaagagagtata
cctgtgaggattgctggtgatgcagatgaagaaatgcatgatggacctcgtactgcactg
gttggagtttggagaccagtgggagcacccaaagcttcaaaagcatatcttctacctaaa
aatgagaatgtgaagccctcaccatacaatgtatctgaagaggaaagtgtagtttcaaat
acactcaagcaacctctccatgaacttctagatgctatgtcatttctggttcaacaagct
actgcatcaacagatatttcccttgatggggaatgtggagatggtccatttgcatggcta
gcatttcaggaacaacagagacgaaggttttcttgtggacctgccatggtccatgcaggc
tgtgggggttctcttgctacttgtcatttcctagatggttctggtgtggaattaatagat
cctctggttgcagatgtttcgccagcagcagtactgagtttgctgcagtcggatgttcga
gcagttattaaaaaagcttttgaggattcaagttctgacggaccattgtctattatagat
tggtgcaaggggcgagtacagttaggtgagggtggtcatgcaggtgacagttcatctggg
gactgtgccctaaatgattccaaggaagctacaagtactattggagatcccataactcca
ccacagtgttcagcggttggttcagtaaatctcaaaggtacaggcttgcaacaaatagat
aatcaaatttctgaagtccaacgtggtagcaagaattggggtatagaaactttatccatg
tcagagggcatgagattggatgatagcagtcaaagacgaacagcactggatgcggaggga
gatctacaaatgggcctgtcacgcaatagaccaacacttatggccctttcagtgcctgct
ttgcttgttggataccaggatgactggttgaagacatcgactagccctattcaactctgg
gagaaagctcctcttgagccatatgcacctcctaaacctgttgcatattatgttatttgt
ccaaatatagatctgctactttctgaatcagctgatttttttcagcagttaagtacggtg
tatgaggcatgcaagcttgggagtcatgatcctgtgaatactgaagggcagcgcttcaat
tctggcaaatgggcttcatcaggtgttgtgcctgtagaatgtccagcacagtttcaaaag
accgtaaacaatttatcttttattggttccataaatgactacttaatgacactggaaaaa
ggttgggatgtgagcagcttctgcaggtctctggcaaaggtgctcaaaagtttcccgatt
ggtgcaaattcaccgggaactcaaaaagacacggataatggtcctttcacggtgctatat
gtaatatgcccctttgccgaaccaggtccaatgcttcagacaatagttgaggcttgcagg
tgccttggagccattgttaaccatcctgacaaagagagaagatcgataacctacagtcat
gttggaaaatctctacactgtgccactacactagatgaaacattgaatttaaatgttccc
actctatttgggttcagtgttccaaaacttgttttgcaagtccttacagcagaaacaatc
ctcaaagctacctgtcctccagtgagtgagttagtcactcttaaagaaatagcttttact
gtgtataataaggctcgacggattcctcgctatgcacctgtttgtgacacactgcaagca
gctacaccatcacttagggctcgaccaggtgctgtgcacatgagcccatctgttacagga
ttctggaaggattgcagtattaaccgtgctacaggagcatcatcattatcaagagagaat
gcactcgatacatcatgcttacgaccaggtgcttgggatagttcctggcaaacgaggcac
agtgagtcaactacatgtgatttaagtgggtctggagattctatttcgcagaatgatgtg
tgctacttgtttgaacctttatttatattgtcagaacctggttccttgagtcaaggtgtt
tctcttcatgtgactggcactgctacctcagattcattgagaactttgtctgatgatgcc
agtggtagtacacagccttcaactgctagtgtgctgggagatattgggtcaagtattgtc
atagatggatcagaatctgactgtttgcgggctggaaatcacagagcaccaagtctccat
tgttgttatggctggactgaggattggcagtggcttatttgtgtctggacagatgctcgt
ggtgaactgctcgatgtccatatatttccatttggtggcattggcagtaggcaggataca
aagggccttgaaagtctttttattcaagttctgcaacaaggatgccaattactgtctgtt
gctcctgatgttggaggtggcagaccaaggagtcttgtaattgcacgcattggatgtttc
tatgaacttgagtgccaagaatggcaaaaagcaatttcagcagtaggaggagatgaaatg
aaaaaatggcctgtgcaactacgtcggtttgcccctgatggcacatctgcaagtagtggt
ggcagcaccattcagccacaggaaatcaatatgatccatgacaggactttgccaccttca
cccagtacagcatcctctatttatggttcacattcaaagacatctaattttattaaaggg
aatgttgggcaacccaacacaagaaaacaggttatttctggacattcacaagaattctcg
aagggtgcttttcattgggtgcaaaatattagtctggtgggattgtgcatagaccactct
ctccaactactttcccaggttgaggcgacttcactaggtggaaatcaaggtgcttcttca
ggaatatcaggctccattgatgggttaaatccagtgaatccacatgtatcaacaactgtg
tcaaacttgtttgttccttcacacaaccttcgattttttcctccaatgcccttacaactg
ccaacatgtcttacatccgagtctccaccactggtgcacttattgcatagcaaaggtttt
gcattcccttttgccactggctttgtagtatccaaaacaactccatccatcaggaaagat
tccatgcagcgcttcaccaaagaggaatggccatccacccttatggtgaacttggttgat
tattatggaggaacaaataccattccaactagtcagcaagtacctataactgctgaagct
attggaaaaagtaagcaaagtagaataccaattatagaggccaaagactatcaagttgag
gctcatttggcattagagtgtgtggcagcagaactacatgcactttcatggttatcagtc
agtcctgcattcttagaccggcgtactgctttaccattacattgtgatatggtgcagcga
ctgcgaagacttatccattatgcttctaaagaatttgggctttcaggaatgcaagaaaga
atgcagtctgtcttgtga
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integrated database retrieval system
