Cryptomeria japonica (Japanese cedar): 131047386
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Entry
131047386 CDS
T10556
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131047386
03012 Translation factors [BR:
cjf03012
]
131047386
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
131047386
Translation factors [BR:
cjf03012
]
Eukaryotic type
Initiation factors
eIF-3
131047386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
131047386
NCBI-ProteinID:
XP_057837230
LinkDB
All DBs
Position
2:complement(35946569..35965143)
Genome browser
AA seq
716 aa
AA seq
DB search
MAETMDMPLLVPGHQLNIDFSQVDLNAIQLPPGEDFGIKSDDEEEEEDSLEFETGFGNVI
VVDNLPVVPPEKFEKLEGVVRKIFGQIGTIRDRGLWMPVDPETQKTKGYCFIEYNTPQEA
QTAKDQTNGYKLDKAHIFAVNMFDDFEKFMKVSDEWVPPETKTYSPIENLHQWLTDEKGR
DQFVIRAQSDTEVYWNDARHLKPELVYRRTHWTESFVQWSPLGTYLATLHRQGAAVWGGA
TTFTRLMRFAHTQVRLIDISPGEKFLVTYSSHEPSNPRDTQRVTLNIFDMRSGVVVREFK
GSADDFATGGTGGVAGVSWPVFRWAGGRDDKYFARIGKNAISVYETDTMGLLDKKLLRVD
NVMDFSWSPTDPILSLFVPEGGGGNQPARVSLVQIPGREELRQKNLFSVSDCKMYWQSNG
DYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDRIVAFAWEPKGHRFAII
HGDGIKPDVSFYSMRSPNNVGRVSKLATIKGRSANALFWSPIGRFIILAGLKSHNGQLEF
YNVDELETMATGEHFMATDIEWDPTGRYVATYVTTVHEMENGFNIWSFNGKLLYRVSRDH
FYQLLWRPRPPSLLSPEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQDREKRKKLQEEWQ
GWVNEWKCLWEEERFLRQALRDGEPSDEEEEYEAEEVEAEEVLDVTEEIASYGFED
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactatggatatgcctctgcttgtgcccggccaccagctgaacatcgatttt
tcacaggtggatttgaatgcaatacagctccctcctggtgaagacttcggcattaagagt
gatgatgaagaggaagaagaagactcgttggaatttgagacggggttcgggaatgtcatt
gttgttgacaatcttcctgttgtgcctccagagaagtttgagaaacttgaaggtgttgtt
cgtaagatttttggccagattggaacaatcagggacaggggtctgtggatgccagttgat
cccgagacacagaagactaaaggttattgttttatagagtacaacactcctcaggaagca
caaacagcaaaagatcaaacaaatggatataagctggacaaagcacacatttttgctgtt
aacatgtttgatgactttgagaaattcatgaaagtatcagacgaatgggttcctcctgaa
accaagacatattctcccattgaaaatttacaccagtggcttacggatgagaaaggacgc
gatcaatttgtcattcgtgctcagtcagacactgaagtttattggaatgatgctaggcat
ttgaagcctgaattagtgtaccgccgtacacattggactgagagctttgttcagtggtca
ccgcttggaacatacttggcaactcttcacaggcagggagcagctgtttggggaggtgct
accacatttaccagattgatgcgtttcgcacatacacaggttagattgattgatatatca
cccggggagaaattcctggtaacttacagcagccatgagcctagtaacccaagagacaca
cagagggttactctaaacatctttgatatgaggagtggtgtcgtagtgagagaatttaaa
ggaagtgctgacgattttgcaactggtggaactggaggagttgctggtgtgtcttggcct
gtattcagatgggcaggcggcagagatgataaatattttgccaggattggaaaaaatgcc
atcagtgtctatgaaacagatacaatgggtctccttgacaagaaactcctcagagttgac
aatgtaatggatttcagctggtctccaacagatccaatattatcactgtttgtgccagag
ggaggtggtggaaaccaacctgcaagagttagtcttgtgcaaattcctggaagggaagaa
ctaaggcagaaaaatctcttcagtgtaagcgattgcaagatgtattggcaaagcaacgga
gattaccttgcagtgaaagtggacagatatacaaaaaccaagaaaagtacctacactggc
tttgagcttttccgcatcaaggaaagagatattcccatagaagtgttagaattagaaaac
aagaatgacagaattgttgcatttgcttgggagcccaaagggcatagatttgctattatt
catggagatgggattaagccagatgtcagtttctattcaatgaggagccctaataatgtt
ggtcgggtttctaaactcgccactattaaaggaagatcagcaaatgcacttttctggtct
cctattgggcgcttcattattttggcagggctaaaatctcacaacggccagcttgaattt
tacaatgttgatgagcttgagacaatggcaactggggagcatttcatggcaactgatatt
gagtgggatcctactggaagatacgtagcaacatatgtcacaacagttcatgaaatggaa
aatggcttcaacatatggtcatttaatggaaagctattatatcgtgtttctagggatcac
ttttatcagttgttatggcgcccaagaccaccctctcttttaagtccagagaaagaagag
gagattgccaagaatttgaagaagtatagcaagaaatacgaggctgaggatcaggatgtt
tcattattgttaagtgaacaagacagggagaaacgaaagaaattacaggaggaatggcag
ggctgggtcaatgaatggaaatgtctatgggaagaagagagattccttcgacaagcattg
cgtgatggagagcccagtgatgaagaagaagaatatgaagcagaagaagtagaagctgaa
gaggtattagatgttacagaagagattgcttcatatggttttgaggactaa
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