Cryptomeria japonica (Japanese cedar): 131047463
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Entry
131047463 CDS
T10556
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131047463
03460 Fanconi anemia pathway
131047463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131047463
03036 Chromosome and associated proteins [BR:
cjf03036
]
131047463
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131047463
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131047463
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
131047463
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
131047463
FA (Fanconi anemia) pathway
Downstream FA components
131047463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
YDG
Motif
Other DBs
NCBI-GeneID:
131047463
NCBI-ProteinID:
XP_057837342
LinkDB
All DBs
Position
7:729432627..729563302
Genome browser
AA seq
1824 aa
AA seq
DB search
MRGAKQVPTWCVTPLEGETGKWKLVRGENFVSKNGGAIPDEDQNSMPSLAELIAKGKAEF
WKNPLVSLQAKSQANQGKAYHPVLAGFQTSLKETRCDRSSVKESRCDGSSLKESGCDGSS
LKESGCDGFSQRPITLQMTSHSVDMPQLNPYHSEFLVNGHDTEHGQDYSRKFVVEQESNL
NASDPQISASSSPPTGNTAEIGKLCKKYSRKRPVFKSSFRNEELKFKNFSKLDVLNKAKP
SGNSSGDGLTSLKGAGDFTGMFKKASGKSVSILSSSLERARALLGKDLGAELINPGCADP
SQNSEVMGLLPTASIIPPAVTIPSIKNAESLCFENLTSEVLESQSVPVPHAEKKIRFQTT
EGEDPVVVPTCSITRPQSAICGHHTLELFKSHDKSVPQTMNKDMKMFGAAKENHVTVLSS
LSQTTSNFEVGTGNPVNVSSLSMQGARNDLGEDTSFTFSELHTRSKSQTINKATAIFQTA
SGNPVTVLPSSIKKALAIFGKSSTSDLHESDTGSTPQKASIMFQTTPGNPVSVRSLTDKN
AKNMTSNEPLETVDHDKPKPMVNTSSEVFQTSTGNCLKTSFAGIKNSETNVQKEKDIQTG
KNNNENALSSNNGICRTSLIFQTAAGKPVVVSISSVKRALSILGDDDNLVVNGGNDTTGS
FENIIEKSAEALLPSYKRGETILGKDRRDISKGEDGEKKHELQLGCADQPKLCDSDKAAF
EFAKIPTKSISVSGETAEESNFVGRKTLSHQSLFHTGTGKPVNISMSGISKAKALLESEG
TEASITNKAYETHGSFANVLSGSAFDQSNFLSDRVSTITANCHNICSIGKAESGSSQMQQ
FTFQTAAGRSVNVSTHAMKRAMDLLGDEANNSTVRMTSLGNAENNTVVSCGPPPLLFQTG
AGRSVSVSSAAMKRARNILGEMSDISSAATDQQRSSEGIVNSFADPAGYSNGVVLNKQSV
PHPNHASRAISSDMNCGPTKLKRLSADFGNAFAGVSPRTPRHCQDAVSNKENLPYANHVS
HVTTEDSFGELILVSGDSRAKKLGKRKVCMSPLAEISNESPICDYDNYLQRPTATPTVHK
SLSGSKRGLFRSRRVTPFKQPRRSMFLSPYDKMPKSVGMESSLSVQSFPQGAPCEVKFQF
CYPLSKKRKTIQEYFGGPPDHQQALWHLSTEIQSMTADSAQHYSFYVKCGSGYDNFIARN
FWKMLLELGADPRNATIEWVENHYKWIVWKLACIERSYARQAAGKFLTVQNVLEELKYRY
EREVNRGHRSPLKKIVEGDAVAASTMVLCVSAIRVWPHQEHNEPSPIKDSMEVLKESENH
ISNGISKPSGDNWGKIELTDGWYCLNAILDEPLCKQLLQRKLFIGQKLRICGASLHGWVG
PLSPLEASRTVSLILHINGTYRAHWAERLSFCRGLPVPLAFRSIKEGGGPVPRTLVGITR
IYPTLYKERLANRAYIIRSERAEDKTLHVYNERRTHIVEDVMLKAEKEHFHSSLDSNKDE
GAHLYRVLENACEPELIMADMTSAQLAAFAAYKSKRELFSQAIRQASIEKHIQKALENAD
LDSRKVTPFMKVRIVGLTHKCLTKIKEKGEKRGLLEQEGLVTIWQPTENHVFNLEEGAIY
CVSGLVPLGGKSGDSYSQNILQFQANRSTVWHRIPISVCHNFEFVYNPRSAVQLSDLGRV
PLHSEFDVAVFVLHIGEPYTYGLRKRQWLFTSDGSVELESGNKQSEIILAIDFSLPCDSF
IALDHSLVGSTVGLCNLVKQKRDQKNSLCVAEMTEISTHSVNFNATNFCHLKAAAELTNK
WAKVSMHAVENLLERVSNIIENAT
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagctaagcaagtgccaacgtggtgcgtgactcctttagaaggggagactgga
aagtggaagctcgtgagaggagagaattttgtgtctaaaaatggcggcgctattccagat
gaggatcagaacagtatgccttcgctcgctgaattaatcgctaaaggcaaagcagaattc
tggaaaaaccctctggtttctctccaagcaaaatctcaagcaaatcagggaaaggcgtac
catccagttttggcaggctttcaaacatctttgaaggaaaccagatgtgacagatcttct
gtgaaggaaagtagatgtgatggatcttccttgaaggaaagtggatgtgatggatcttcc
ttgaaggaaagtggatgtgatggattttcacaaagaccaattaccctgcagatgacctca
cattctgttgacatgccacaactaaatccttatcattcagagttccttgtcaatggacat
gatacagaacatggacaagattattctagaaaatttgtagtagagcaggagtcaaacctt
aatgccagtgacccacagatatctgcaagtagctcacccccaactggtaacactgctgaa
ataggaaagttgtgtaagaaatatagcaggaaacgaccagtgttcaagtcatctttcaga
aacgaagaactgaaatttaaaaatttctcaaagcttgatgtgttgaataaagctaagcct
agtggaaattctagtggagatggtttgacttctttaaaaggagctggtgattttactggc
atgtttaagaaagcttcaggaaaatctgtcagtatattgtcttcgtccttggaaagagca
agggctcttcttggtaaggatctcggtgcagaattaattaatcctggatgtgccgatcct
tcacagaatagtgaagttatggggctgttacctactgcttccataattcctccagctgtt
acgattccctctatcaagaatgcagagtctctttgttttgaaaatcttacatcagaagta
ttggaatcccagagtgtgccagtgccccatgctgagaaaaagataagatttcaaactact
gaaggagaagatccagtagtagttccgacatgttccatcacgagaccacaatctgctatt
tgtggacatcatactttggagttattcaaatcacatgacaaatctgtcccccaaacaatg
aataaggatatgaaaatgtttggcgctgccaaagagaatcatgtgacagtgttgtcttct
ctgagtcagaccacatcaaattttgaagttggcacaggaaatcctgtaaacgtttcctct
ttgtcaatgcagggagccagaaatgatttgggggaagacacgtctttcacattttccgaa
ttacatactagatccaagtcacagaccataaataaggcaactgcaatttttcaaactgct
tctgggaatccagtgacagtgcttccctcatccatcaagaaagcccttgctatttttggg
aagtcatcaacatcagacttacatgagtcagacactgggtccactccgcagaaggctagc
ataatgttccagactacaccaggaaatcctgtgtcagtacgatctttgactgataagaat
gcaaaaaatatgactagtaatgaacctttagaaacagtggatcatgacaagccaaaacca
atggttaatacttcttcagaagtgtttcaaacttccacaggaaattgtttaaagacgtct
tttgctggtataaaaaattcagagactaatgtgcaaaaggaaaaggatatccaaacaggg
aaaaataataatgagaatgctttaagttctaacaatggaatttgtcgaacatctctgatc
tttcagacagcagctggaaaaccagtggtggtgtcaatatcttcagtgaaaagggcctta
tctattcttggtgatgatgacaacctagttgtcaatggaggcaatgataccactggaagt
tttgaaaatatcattgaaaagtctgcagaagcactattgccctcttataaaagaggagaa
actattcttggaaaagatagaagggatataagcaagggagaggatggtgaaaagaaacat
gaactccagttgggatgtgctgatcaacctaaattatgtgacagtgacaaggctgccttt
gagtttgcaaagattcccacaaagtcgatatctgtatcaggtgaaactgcagaagaaagc
aattttgttggtcgtaaaactctttctcatcaatctctatttcatacaggcactgggaag
cctgtaaatatctccatgtctggtatctctaaagctaaggcacttctagagtctgaaggc
actgaagcttctatcaccaataaggcttatgagacccatgggagttttgctaatgtgctt
tctggttcagcatttgaccaatcaaactttttatctgacagagtttcaacaatcactgcc
aactgtcataatatctgctcaataggtaaggcagagtctggatcaagtcagatgcaacaa
tttacatttcaaactgcagcaggccgatcagtcaatgtgtccacacatgccatgaaacgg
gcaatggatcttcttggggatgaagcaaacaatagtacagtgaggatgacgtcattggga
aatgcagaaaataacacagttgtttcttgcggaccacctcctttactattccaaactgga
gccgggagatctgtttcagtttctagtgctgccatgaaacgagctagaaatattcttggt
gaaatgagtgatatatccagtgctgcaactgatcaacaaagatcgagtgaaggcattgtc
aactcctttgcagatcctgcaggatattccaatggagttgtattaaacaaacaaagtgtt
cctcatcccaatcatgcctccagagccatttcctcagatatgaactgtggtccgactaag
ttgaaaagattgagtgcagattttggcaatgcttttgcaggtgtttctcctcgaactcct
agacattgccaggatgccgtgtcaaacaaagaaaatcttccctatgcaaatcatgtgtcc
catgtgacaactgaagattcttttggagagttgatattagtttctggggattctagagca
aagaaattaggtaaacgaaaagtctgcatgagtcctttggctgaaatttccaatgaaagc
cctatttgtgattatgataattatttgcaacgaccaactgcaactcctactgtgcataag
tccttgtcaggaagcaagcgggggttgtttcgttcaagacgtgttactccattcaaacag
cctcgccgttctatgttcttgtctccttatgacaaaatgcccaagtctgttggtatggaa
tccagcttatctgtacaatccttccctcagggagctccatgtgaagtaaagtttcagttt
tgctatccattgtccaaaaaaagaaagacaatacaagagtactttggtggtcctccagat
catcagcaagcgttgtggcatttgtccacggaaattcagtctatgactgcggattctgct
caacattacagtttctatgtcaagtgtggttcaggttatgacaacttcatagccaggaat
ttttggaaaatgctgcttgaattgggtgctgatccacggaatgctacaattgaatgggtg
gagaaccattacaaatggatagtttggaagctggcttgcattgaaagaagctatgcaaga
caagctgcagggaaattcttaaccgtgcaaaatgttcttgaagaattgaagtacagatat
gaaagagaagtaaaccgtggtcatcgttctccactcaagaaaattgttgaaggagatgca
gtggctgcaagtacgatggttctttgtgtttcagcaatacgtgtatggccccatcaagaa
cacaatgaaccatctccaattaaggattcaatggaggttttgaaggagtcagagaatcac
attagtaatggcatttcaaaaccatctggtgataattggggaaagatagaattaactgat
ggatggtactgtctgaatgcaattttggatgaaccactttgcaaacaactcttgcaaagg
aaattatttattgggcagaaactccggatttgtggtgcaagcttgcatggttgggttgga
cctttgtctcccctggaggcatctcgaacagtctcattaatactacatataaatggaaca
tacagggcccattgggctgaacgcttgagcttctgtcgaggccttcctgtgccactggct
tttagaagcattaaagaaggtggaggtcctgttcccagaacactggttggaattacacgc
atttatccaactctatataaggagaggcttgcaaatcgagcatatattataaggtctgaa
cgagccgaagacaaaacattgcatgtgtacaatgaaaggcgcacacacattgtggaggac
gttatgttgaaagcagagaaagagcatttccattcatcacttgattcaaacaaggatgaa
ggagcacacctttatcgtgttctcgaaaatgcttgtgagcctgaattgataatggcggat
atgacttctgcacaacttgctgcttttgcagcttataagtctaaacgagagttgttttct
caggcaattaggcaggcttccatagagaaacacattcaaaaggccctggagaatgctgat
ttggactccagaaaggttactccattcatgaaagtaaggatagttggtttaacacacaag
tgtttgactaaaataaaggaaaaaggagaaaaaagaggtttgttagaacaggaaggtttg
gtcacaatttggcaaccaacagaaaatcatgttttcaatcttgaggaaggggccatctac
tgtgtctctggccttgttccactgggtggcaaatcaggtgatagctacagtcagaatata
cttcaatttcaagcaaataggtcgacagtatggcatcgaattccaatatcagtgtgtcat
aactttgaatttgtctacaacccaaggagtgcagtgcaactttcggacttgggaagagtt
cctttgcacagcgagtttgatgttgctgtttttgttctacacattggcgaaccatataca
tatggcttgcgaaaaaggcagtggttgtttacttctgatggttcggtagaattagagagt
ggcaataaacaatcagagatcatccttgcaattgacttttcattaccttgcgattcattt
attgctcttgatcactctcttgtaggatccacagtgggattatgtaatttggtgaaacaa
aaacgagatcagaaaaacagtctttgtgttgcagaaatgacagaaatttctacacattct
gtaaattttaatgctactaatttctgtcatttaaaagctgcagcagagttgacaaataag
tgggccaaagtctccatgcatgcagtagagaacctcttggagagggtgtctaatataatt
gagaatgcaacgtga
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integrated database retrieval system
