Cryptomeria japonica (Japanese cedar): 131047484
Help
Entry
131047484 CDS
T10556
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00500
Starch and sucrose metabolism
cjf01100
Metabolic pathways
cjf01110
Biosynthesis of secondary metabolites
Module
cjf_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
131047484
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cjf01003
]
131047484
Enzymes [BR:
cjf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
131047484
Glycosyltransferases [BR:
cjf01003
]
Polysaccharide
Storage polysaccharide
131047484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glyco_trans_4_4
Glycos_transf_1
Glyco_trans_1_4
Ig_PIFI
CBM_48
AMPK1_CBM
Motif
Other DBs
NCBI-GeneID:
131047484
NCBI-ProteinID:
XP_057837374
LinkDB
All DBs
Position
4:377119362..377422259
Genome browser
AA seq
1124 aa
AA seq
DB search
MANLSALHKSMTWRISVNASLEPTRFFCNTSSKFHASFAPFSEVRNGALQDVSKNNRLST
NIVARREFTRRSRKKSHQPKTKDAFSRDSPGSPISAPALAKDLQDQDKGKKEQDVTDIDS
DEIDKTSRGAQQVVVTGGKRNLKKKNIKGIDSDLIENRRSQLGTEESEKEKSQDIRASQK
LHVAQDVNAVIKEEAEILERQNIEKEKAEARKRDLEKLANENSSVHNKIFFYPIPAKAGK
EIKIFFNKSITTLSNEPKVFIMGAFNNWKWNSFMTELQKSEISGDWWTCKLSIPKEVYQI
DFVFFNGVEIYENNDNRDFSIVVEGGLDKQSFEDLLLEEKRRELERLSAEEAERERMAAE
QQRLEKEKAAVEADRAEAKKLVAERREQTWQVLQMAVKSVSGLWHIEPDDFKGGDRVKIY
YNRKSRPLALSSDVWIHGGYNNWQDALSIVHKLAYDNAEDGDWWSVEVEVPNRAFILNWV
FADGPPGNAKVYDNNNYQDFHAVVPKSIPEELFWAEEENFVFLRLQQERQKNEDAARRKA
EKMQRLKAEMKQKTKKRFLESQKHIFYTEPMEVQAGKSAVVFYNPSNTVLNGKAEVWIRC
SFNRWTHRLGSLQPQKMVSVDNSSHLKANVKVPLDAYMMDVVFSERGDEHGGLYDNRNGM
DYHVPVVGGVLRESPMHIVHVAVEMAPIAKVGGLGDVVTSLSRAVQDLGHSVEIICPKYD
CLNYSHVRDLQFRQEFYWGGTQIKVWHGKVEGLSVYFIEPNNGMFRVGSIYGRKDDGQRF
GFFCHAALEFLLQSGSNPDIIHCHDWTSAPVAWLFQEHYKHCALANARIVFTIHNLEFGA
ALIGRAMAHAHKATTVSYTYAHEVSGHAAIAPHQYKFHGILNGIDPDIWDPFNDQHIPMA
YTKENVVEGKRAAKEELQCRLGLKQVDRPLVGIITRLTAQKGVHLIKHAIRRTLDRSGQV
VLLGSAPDPRIQNDFNNLAKHLHNTNGDMARLYLTYDEPLSHLIYAGADFILVPSIFEPC
GLTQLTAMRYGSIPVVRKTGGLNDTVFDVDHDKGRAEAEGLEPNGFSFEMPDAAGLDYAL
NRALSAWYEKRDWFNLLCKQVMDQDWSWNRPALNYMELYHSARK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatctttcagcgctgcacaagtcaatgacatggagaatcagtgttaatgcttcg
ttggagcctacccgcttcttttgcaacacctcttccaagttccacgcttctttcgccccc
ttttccgaggtccggaatggtgctctgcaggatgtttcaaaaaataatagactttccaca
aacattgtggcacgtagagagttcaccagaagatctcgtaagaaatcacaccaaccaaag
actaaggatgccttttcaagggactctccagggtcccctatttctgctccagcgctggca
aaagatttgcaagatcaagataagggaaaaaaggaacaggatgtcactgatatagactca
gatgaaattgacaagacaagccggggagctcaacaagtggtggtaactggtgggaaaagg
aatctgaagaagaaaaatataaaaggtattgacagtgaccttattgaaaacagacgatct
caactaggcaccgaagaatctgaaaaagagaaatcacaagacattcgtgccagtcaaaag
ttacacgtagctcaagatgtaaatgctgtaataaaggaggaagccgagatattggaaaga
cagaacatagagaaggaaaaagctgaggcaaggaaaagggatttggaaaaacttgcaaac
gagaactcttctgttcacaataagatattcttttatcctattcctgcaaaggcagggaaa
gaaattaaaatattctttaataaaagcataacgaccttatccaatgagccaaaggttttt
ataatgggggctttcaataactggaaatggaattctttcatgacagagttgcaaaagagt
gaaatcagtggcgattggtggacttgtaaactaagcataccgaaggaggtataccaaata
gactttgtgttcttcaatggagttgaaatttatgaaaataatgacaacagagatttctca
atagtagttgaaggtggattggacaaacaatcttttgaagaccttctgcttgaagaaaaa
cgcagggagttggagcgactttcagcagaggaggctgagagggagagaatggccgcagag
caacaaaggctggagaaagaaaaagctgcagtggaagcagatagagcggaagcaaagaag
ctagtggctgaaaggcgagaacaaacatggcaagtcttgcagatggctgtaaaatctgtc
agtggcttatggcacattgagcctgatgattttaaaggaggagacagggtgaaaatttat
tataatcgaaaatcacgtccacttgctttgtcttcagatgtttggattcatgggggctac
aacaattggcaagatgcattgtccatagttcacaaactggcctatgataatgcagaagat
ggcgattggtggtctgtggaggtggaggtcccaaatcgagcatttattcttaattgggtc
tttgctgacggacctccagggaatgctaaggtgtatgacaataataattatcaagatttt
catgccgttgtaccaaaatctatcccagaagaactcttttgggccgaagaagaaaacttt
gtttttttgaggcttcagcaggagagacaaaaaaatgaggatgcagctcgtagaaaggct
gagaaaatgcaacgtttaaaagctgaaatgaagcagaaaactaaaaaacggtttttggag
tctcaaaagcacatattctacacagaacctatggaagttcaagctgggaaatctgctgta
gtcttctacaatccatcaaatactgttttgaatggcaaagctgaagtatggattcggtgc
tctttcaatcgctggacacatcggctagggtctcttcagccccagaaaatggtctctgtt
gacaacagctcccatctgaaagcaaatgttaaggttcccctagatgcatacatgatggat
gttgtattttctgaaagaggtgacgagcatgggggattgtatgacaacagaaatgggatg
gactatcatgttcctgttgttggaggagttctgagggagtcaccaatgcacattgtgcat
gtagcggtggagatggcacctattgcaaaggttggaggcttgggtgatgtggtgacaagt
ctttctcgtgcagttcaagacttgggacatagtgttgagattatttgtccaaagtatgac
tgtcttaattatagccatgtgcgtgacctgcagtttaggcaagaattctattggggaggt
actcaaatcaaagtctggcatggaaaggtggaaggtttatctgtatattttattgaaccg
aataatggaatgtttcgggttggttctatttatggacgtaaggatgatggacaacgattt
ggatttttttgccatgcagctcttgaattcttacttcaaagtggatctaatccggacatt
atacactgccatgactggacaagtgcaccagttgcatggttgtttcaagaacattacaag
cactgtgccttagcaaatgcccgcattgtttttacaattcataatctagaatttggtgct
gctctgattggaagggcaatggcacatgctcacaaggcaaccacggtttcatatacatat
gcacatgaagtctcaggacatgcagctattgctccacaccaatataagttccatggcatt
ttgaatgggatagatcctgatatttgggatccttttaatgatcaacatatacctatggct
tacactaaagaaaatgtggttgaaggtaagagggctgcgaaggaggaattacagtgccgc
ctgggtttgaagcaagttgaccgccctttagttggaattataactcgattgactgctcaa
aagggtgtccatctcatcaagcacgccattcggcgtacacttgaccgtagtggtcaggta
gttttgcttggttcagctccagatccacgcatacaaaatgacttcaataatttagcaaaa
catctacacaatacaaatggtgatatggcacgactttacttgacctatgatgagcctctt
tcacatttgatatatgcaggtgcagattttattcttgtgccatcaatatttgagccatgt
ggattaacccagttgacagcaatgcgctatggatctatccctgttgtccgtaaaactgga
ggactcaatgatacagtatttgatgtagatcatgacaaaggtcgagctgaagcagaaggg
cttgagccaaatggattcagctttgaaatgccagacgctgctgggcttgattatgctctc
aatagggcattgtctgcatggtatgagaaacgtgattggtttaatttattgtgcaagcaa
gtaatggatcaagactggtcatggaatagaccagcactgaactatatggaactttaccat
agcgcaaggaaatga
DBGET
integrated database retrieval system
