Cryptomeria japonica (Japanese cedar): 131047898
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Entry
131047898 CDS
T10556
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
KO
K03255
protein TIF31
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cjf03012
]
131047898
Translation factors [BR:
cjf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131047898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_8
TPR_9
TPR_MalT
TPR_16
CLU
TPR_1
Motif
Other DBs
NCBI-GeneID:
131047898
NCBI-ProteinID:
XP_057837692
LinkDB
All DBs
Position
3:complement(388195164..388217109)
Genome browser
AA seq
2156 aa
AA seq
DB search
MAPRTGRAKPHKAKGEKKKKEEKILPTVLDITVNTPDESQIILKGISTDRILDVRRLLAV
NVETCHLTNYSLSHEVRGDKLKDSLDVVTLKPCVLTIVEEDYTEEDAIAHVRRLLDIVAC
TTCFGSSGKQMEPRSGQGGVKESAHSTTDTEQANETSVKKCSSNKERKELNKDGKVESDD
KSELPQKVEGNLDSTIKDDGGEKKSNNVVKGSNMSLKEGKSEAVAAMDAAKEATEKGDMT
GMCPPSKLGQFYEFFSFSHLVPPIQFIRKSTRQSVEEKRSEGEFFSIDVKFCNGKMVTAT
ACTKGFYSHGKQLVQSHTLVNLLQQLSRAFTNAYDCLMKAFSERNKFGNLPYGFRANTWV
VPPMVADSPSVFPPLPVEDESWGGNGGGQGRDGKSDLRPWATEFSILAAMPCKTVEERQV
RDRKVFLLHSLFVDVAIIKAVAAIQHVIDRHKILDQTKYQDPTRILHEETVGDLKIMVTR
DVPDASRKLDKKIDGSQAPGMSSRELAERNLLKGITADESTTVHDTATLGVVIVKHCGYT
AVVKVFGDVEKGVESLSREIDIEDQPEGGANALNVSSLRTLLHKGAPRVQSNSAMHQCNG
SESEDMQSARTLVQKVLEDSLLKLQEEQTDHRRFIRWELGACWVQHLQNQPTSEKNETKS
SEESKNEPVIKGLGKHGLLKEIKKKTTDDKNNKAESDKIKSLDISAGNEIENKRQVTEIA
CDREAQKEEIENELPLKKLLPEAAFMRLKESETGLHCKSLDDLIEMAQKYYNDVALPKLV
ADFGSLELSPVDGRTLTDFMHTRGLQMHSLGRVVELADKLPHVQSLCIHEMVVRAFKHIL
EAVVASVESTSDLAAAIAAALNIMLGTPSKENSDTNSVDLFKWEWIELFLNKRFGWKMNN
SHRQDLRKCAILRGICHKVGLELAPRDYDVDSPNPFRNMDIISMVPVYKQVACSSADGRT
LLESSKTALDKGKLDEAVNYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQAM
IYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSH
PNTAATYINVAMMEEGLGNIHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLME
AYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLDYFDSKALEQQEAARNGTPKPDASIA
SKGHLSVSDLLDFINPNAEMKDKKKQSRIKLRSKPAQTQWSTEMDDFTKEIQLSPTYDIQ
KQLSEPEQSGEPTISTNVPTKSKDDITGLDVEGQTPASEVSAAESMEEEGWQEAVPRGRS
SNAGGRKFGIKKPNLTRLNTNMSNNTLNSPEPAHNRINNNNTNDSVSASKRKIMSSGANN
NFTSRNVSADSVASRKLVKASTFNGRPMPSIKPGIGTDNFGTSQLITSSPKSSPTTPGVT
NPSKVSNDTEGKHVPKPTRQTTPLKTAIPVYNKIPLTTTATNSSSAIVAAIPGKTPSYKE
VALAPPGTIVKATLDTAKQDAPDAPQDDTEMQTEKESRVEKEQEVVIKEEEKLKTEPVAE
KDEYICTCRAKKGVEIIKQEITIEKTSQIEPVELEQVKSEMKMTNSNNEIEATDSSVQSL
EEEKLCPNVGSISSSENVNCTEQVTSGRDVETPTSPKNGDSEESPKNSASQEKTQIDFNS
AGNSSADPEILKVDEEEKVLVSEGGHSGELTVTSPQESSKKLSAAAPPFNPGMSPPILPI
FGPIAVTPFKDGRAADTGGILPYPTIPPVNNTMAAVTPIRKSPHQSPAARVPYGPRLAGY
NRTLPRAPRGKQATTTSNGDQNCHNVPCSMNPNAVEFVPGKAWQSSNSVSPLASPVHTNS
GEDDIEVQSDGNEKSSMSEPITVDDVPEEVVSTMVEEMAIPEQKMPETASDTTISIEKNE
IALINNQVSEAQQANSSEAYSSQDEINKQQDSSAAQNSAADEDNFQDSGIEQPVCKSSKT
ISSKPWADYASSESETEADDATAADAALDAVEGDSAIVAIVYTPKGRHDMGTDEASANIH
FESSHYSNGQITEQMNQYDHKDDDGQRPDEEHLPENGHTMSECSEGSDSGSGEAGANGKQ
SDGDRDGFTLVTNKRRNYRNHQLKTSKNDSFYRRKTTEAPGNHTNGEPLTAPLVSP
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atggccccccggactggccgtgctaagccacataaggccaaaggcgaaaagaagaagaag
gaagagaagattcttcccactgtcctggacattacagtcaacactccagatgagtctcaa
atcatcttaaagggaatttccacagaccgcattcttgatgtacgccgattgttagcggtg
aatgtggaaacatgccatctgactaactattctttgtcccatgaggttcgtggcgacaag
ctgaaggattcgttggatgttgtgaccttgaagccttgtgtccttaccattgtggaggag
gactataccgaagaggatgctattgcacatgttagaaggttactagacattgtggcatgc
acgacatgctttggatcttcaggaaagcaaatggagccaaggtccgggcagggaggtgta
aaagaatcagctcactcaacaacagatacagagcaggccaatgaaacttccgttaaaaaa
tgctccagtaataaagaaagaaaagaactaaataaggatggaaaagtagaatctgacgac
aaatcagagcttccccaaaaagttgaaggcaatcttgactctaccataaaagatgatgga
ggagaaaagaaatcaaataatgttgtcaaaggaagtaacatgtccttgaaagaagggaaa
tctgaggctgttgcagctatggatgctgccaaagaggcaacagagaaaggggatatgaca
ggaatgtgccctccttctaagcttggccagttttatgagttcttctcattctcacatctc
gtgccccctattcaatttataaggaagtccacaaggcaatctgttgaagaaaaacgttct
gaaggagaatttttttcaatagatgtgaagttttgcaatgggaagatggtgactgcaaca
gcatgcaccaaaggtttttatagtcatggaaagcaacttgtccaaagtcatacacttgtc
aacttgctacaacaactgagcagggcttttactaatgcttatgattgtctaatgaaggcc
ttttccgagcgtaataagtttggaaaccttccatatggatttcgtgcaaacacatgggtt
gtcccacccatggttgctgattcaccatctgttttcccacctctaccagtggaggatgag
agctggggtggcaatggtgggggccaaggaagggatgggaagagtgatttaaggccctgg
gcaacagaattttccattctagcagcgatgccatgcaaaactgtggaggaaagacaagtt
agggatcggaaagtgtttctacttcatagtttatttgttgatgttgccatcatcaaagct
gtagctgccattcagcacgttattgataggcacaaaattttagatcaaacaaaatatcaa
gatcccaccagaatattgcatgaggaaactgttggagacttgaagataatggtcacaaga
gatgttccagatgcaagcagaaaactagataaaaagattgatggtagccaagccccagga
atgtcttctagggaacttgcagaaagaaatttgttaaaaggaataactgcagatgagagt
acaactgtgcatgatactgccactttaggagtcgttattgttaaacattgtggctataca
gcagtggtgaaagtttttggcgatgtagaaaaaggagtggaatctctatcccgggaaatt
gacattgaggatcagcctgaagggggtgctaatgctctaaatgtcagtagtttaagaacc
cttctacacaagggagccccccgtgtacagtcaaattcagcaatgcaccaatgcaatggt
tctgaatctgaggatatgcaatcagcaagaactttggtccagaaagttttagaagatagt
ttacttaaactgcaggaagaacaaactgatcatagaaggttcattagatgggagcttgga
gcatgctgggtgcaacacctacagaaccaaccaacatcagaaaaaaatgagacaaaatct
agtgaggaaagcaaaaatgaacctgtcattaagggacttgggaaacatggattgctaaaa
gagataaaaaagaaaacaacagatgacaagaataataaagctgaatcagacaagataaaa
tctcttgacatctcagctggtaatgaaattgagaacaaaaggcaggttacagaaatagct
tgtgaccgtgaagcacaaaaagaagaaatagaaaatgaactaccactgaaaaaattgctt
ccagaagctgcatttatgcggttaaaagaatctgaaactggcctccattgcaagtctctg
gatgatcttattgagatggctcagaaatactacaatgatgttgcgctaccaaaactggta
gcagactttggctcattagaactgtcaccagtggatgggcggacattgactgattttatg
catacacgagggttgcagatgcattctttaggccgtgtggttgaacttgcagacaaactt
cctcatgtgcaatcactttgcattcatgaaatggtggttcgtgcctttaagcacatatta
gaagcagtagttgcttctgttgaaagcacttcagatttggctgcagccattgctgcagct
ttgaatataatgcttggaacaccatcaaaagaaaacagtgatactaatagtgtagatctc
tttaaatgggaatggattgaattgtttttgaacaagagatttggatggaaaatgaataat
tcacatcgccaggatttgagaaagtgtgcaattttacggggaatttgccataaggtggga
cttgagctggctcctagagattatgatgtggacagcccaaatccatttaggaatatggac
atcataagcatggtacctgtctataagcaagtagcatgctcatctgcagatggtcggaca
ttgttagaatcatcaaaaactgctttggacaagggaaaacttgatgaagctgtcaactat
gggaccaaggctttggcaaagctggttgcagtttgtggtccttaccatcgaatgacagct
ggagcatacagcttactggctgttgtattatatcatacaggggatttcaatcaggctatg
atatatcagcaaaaggctttggatatcaatgagagggagcttggccttgaccatccagat
accatgaaaagttatggcgaccttgctgtattctattatcggcttcaacacactgaattg
gcactgaaatacgtcaatcgtgcattgtatcttttgcacctaacatgtggaccatcacac
ccaaacactgctgcaacgtacattaatgttgctatgatggaagaaggtctgggaaatatc
catgtagctctaagatatttgcatgaagccttaaaatgcaatcaaagactgcttggagca
gatcatatacagactgccgctagctatcatgcaattgctattgctctttcattaatggaa
gcatattctttaagtgttcagcatgagcagacaactttgcaaattttacaagcaaagctt
ggctccgaagatttacgtacgcaggatgctgctgcatggctggactattttgactcaaag
gccttggagcagcaagaagctgcacgtaatggtactccaaaaccagatgcatccatagcc
agtaaaggccatcttagtgtatccgacctgctggattttataaatccaaatgcagagatg
aaagataaaaagaagcaatctcgtatcaagttaagaagtaaacctgcccaaacccaatgg
agcacagagatggatgattttacaaaagaaattcaactttccccgacttatgatattcag
aaacaactttcagaaccagaacagagtggagaaccaactataagcactaatgtccctact
aaatcaaaagatgacataactggactggatgtagaaggccagacacctgcctctgaagtt
tcagcagctgaaagcatggaggaagaaggatggcaagaggctgttccaagaggccgatct
agcaatgcaggaggtcgtaaatttggcataaaaaagccaaatcttacaagattgaacact
aatatgtcaaacaacacattgaatagcccagaacctgcacataatagaataaacaacaat
aacacaaatgacagcgtatcagcttctaaaaggaaaatcatgtcttctggagcaaataat
aattttacatcaagaaatgtttctgcagattcagtggcctcaagaaaactggtaaaggct
tcaacttttaatggcagacccatgccatccatcaagcctggtataggaacagacaacttc
ggtacttcacaattgataacaagcagccccaaatcctcacctactactcctggtgttaca
aatccatcaaaagtaagcaatgacacagagggaaagcatgtgcctaaaccaactcgacaa
acaactccactgaaaacagcaattcctgtttataataaaattccattgactacaacagca
acaaactcatcaagtgctattgtagctgctattcctgggaaaactccttcatacaaagaa
gtagctttagcacctcctggaactatagtaaaagcaacactggatacagccaaacaggat
gccccagatgctcctcaagatgatacagaaatgcagactgaaaaagaatccagagtagaa
aaggaacaagaggtagttatcaaggaagaggagaagttgaaaacagagcctgtggccgag
aaagatgagtacatatgtacatgtagagcaaagaagggtgtagaaattataaaacaagaa
ataactatagagaaaaccagtcagatagaaccagtggaacttgaacaagtaaaatcagaa
atgaaaatgactaactcaaacaatgaaattgaggcaactgatagttcagtccaatcttta
gaagaggaaaagctttgtccaaatgtaggttctatttcatcctctgaaaacgtaaattgt
accgaacaggtgacatctggcagagatgttgaaacgcctacttcccccaaaaacggggat
tccgaggaatctcctaaaaattctgcttctcaagaaaagacacaaattgattttaacagt
gctggcaatagttctgcggatccagagatcttgaaggtggatgaagaagaaaaggtgctt
gtatcagaaggaggtcattctggagaattaactgttacaagtcctcaagaatctagcaaa
aaactttctgcagctgctccaccattcaatccaggcatgtcaccacctatactcccaatt
tttgggccaattgctgttacaccattcaaagatggaagagctgctgatacaggtggaatt
ttaccttatcccaccatacctcctgttaacaacaccatggcagccgttacacctatccgt
aaatcacctcatcagtctccagcagcaagagtaccttacggccctcgtttggcaggatac
aacagaacactcccccgtgctcctcgcgggaagcaagctacaaccacttcaaatggtgat
caaaactgtcataatgttccttgcagtatgaaccctaatgctgttgaatttgtacctgga
aaagcttggcaatcctccaattctgtgtctcctcttgcctcaccagtacataccaactcc
ggtgaggatgatatagaagttcaatctgatgggaatgaaaagtcttcaatgtctgagccc
ataacagttgatgatgtcccagaagaagtggtttcaactatggtggaagagatggctatt
cccgaacaaaaaatgccagaaacggcttcagacactacaatctcaattgaaaaaaatgaa
atcgctctcataaataatcaagtaagtgaagcacagcaggccaattcatcagaagcttac
tccagtcaagatgaaatcaataaacagcaagattcaagtgctgctcaaaattcagcagca
gatgaggataattttcaagattctggaattgagcagcctgtgtgtaaaagctcaaagacc
atttcatctaagccctgggcagactatgctagcagcgaaagtgaaactgaggccgatgat
gctactgctgctgatgctgctttggatgctgttgaaggtgacagtgcgatagttgccatt
gtctacacaccgaagggaaggcatgatatgggtacagatgaagcctcagccaacatccac
tttgaaagttcccactattctaacggtcaaattactgaacagatgaatcaatatgatcat
aaggatgatgatggacaacgaccagatgaagagcatctgcccgaaaatggacacacaatg
agtgaatgctctgagggcagcgacagtggtagtggagaagctggtgccaatggaaaacag
agcgatggggacagagatggcttcactctagtgaccaacaagaggagaaattataggaac
catcaattaaagacctcaaagaatgattctttttacagaaggaagacgacagaagcccca
ggaaaccatacaaatggagaacctcttacagctcccttggtcagtccctag
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integrated database retrieval system
