KEGG   Cryptomeria japonica (Japanese cedar): 131048129
Entry
131048129         CDS       T10556                                 
Name
(RefSeq) DNA-damage-repair/toleration protein DRT111, chloroplastic isoform X1
  KO
K12840  splicing factor 45
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131048129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131048129
Spliceosome [BR:cjf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131048129
 Complex B
    131048129
SSDB
Motif
Pfam: G-patch RRM_1 G-patch_2 DUF5401
Other DBs
NCBI-GeneID: 131048129
NCBI-ProteinID: XP_057837969
LinkDB
Position
1:604711983..604721575
AA seq 416 aa
MLGGLYGDLPPPSSVSIDEDAANANAAATAASVLWSSSAKMAPPTLRKPPALFASPQSIL
RNQQPTVSGAKSKGAAAAPSFPPRVTYAEPVGVDVKEAPFQPALVGVTSSVMEEYDPARP
NDYEEYRRERRRRAVEAEMRRELERRRQEEEERERELAALRELEEANAIASSNSTATAAA
SFAAAEKDAALNISGEEAWKRRAAMSGSAPPPRSPSPPPGGGDGGFSIGKSATGGLGVGA
GGQMTAAQRMMARMGWKEGQGLGKQEQGITTPLMARKTDKRAGVIVNASESNRPEKKIKS
VNITAPPTRVLLLRNMVGPGEVDDELEDEVASECAKYGTVTRVLIFEITEPDFPTDEAVR
IFVQFERSEQTTKALIDLDGRFFGGRVVHASFYDEDRFSKNELAPAPGEVPSYPAL
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgctgggtggactgtatggggatttacccccgccttcttcggtctccatagacgaagat
gcagccaatgccaatgcggccgccaccgctgccagtgtactgtggtcgagcagtgcaaaa
atggcgccgcccactctgcgcaagcccccggcgctctttgcttcccctcagtcgatactt
agaaatcagcagccaacggtctcgggggctaaatccaagggtgccgcggctgccccgtct
tttccgccgagggttacatacgctgagcctgtgggggtcgatgtgaaggaagcacccttt
cagcctgctttggtgggggtgacctctagtgttatggaggagtatgaccctgcaaggccg
aatgattatgaggagtataggagggagcggaggagaagggctgtggaggcggagatgaga
agggaattagagcggcgacgacaagaggaagaggaaagggagcgcgaattggccgcgttg
cgggaattggaggaggccaatgccattgcctcttccaattctactgccactgctgctgcc
tctttcgctgcagcagagaaggatgccgctctcaacatcagtggcgaggaagcctggaag
cggcgggcagcaatgagtggcagtgctcctcctcccaggtctccttcccctccgcctggt
ggtggggatggaggatttagtattgggaagtcggcaaccggtgggctgggtgttggtgct
ggtgggcagatgactgctgcacagaggatgatggctaggatgggatggaaggaggggcag
ggattagggaaacaggaacaggggattaccacaccattgatggcgaggaagacagacaag
agagctggggttattgtcaatgctagtgaatccaacaggccagagaagaagatcaagagt
gtcaatattaccgctccacctacaagggttttgcttctcagaaacatggttgggccagga
gaggtggatgatgaactggaagacgaagttgcctcagagtgtgctaagtatggaacagtt
acacgtgttctaatctttgaaatcactgaacctgatttcccaactgatgaagctgttaga
atatttgtgcaatttgaacgttctgagcaaacaactaaagctctcattgatcttgatgga
cgattttttggtggacgggtggttcatgcaagcttctatgatgaagataggtttagcaaa
aatgaattagcacctgcaccaggagaggtgccttcataccctgctttataa

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