Cryptomeria japonica (Japanese cedar): 131048173
Help
Entry
131048173 CDS
T10556
Name
(RefSeq) protein spotted leaf 11
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131048173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131048173
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131048173
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
U-box type E3
131048173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
ARMC9_ARM
HEAT_ECM29
MOR2-PAG1_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
131048173
NCBI-ProteinID:
XP_057838039
LinkDB
All DBs
Position
3:952338229..952342001
Genome browser
AA seq
463 aa
AA seq
DB search
MEKRNGGAELKKELRRLVGLVIQEEEGNGGLITVEVFDKIGALLKDLRELKFGRAAELRR
SDFVGRVEEVSACSDSLPVPPDYFLCPISSDIMRDPVMLATGQTYDRPYIQAWLDADHRT
CPKTQQVLPNLILTPNYLVRSMIEQWCETHGIDYPHSKEPPGGAPGLMAPHEVKYVSLLL
DKLAGKFQSQQREAAKELRVLTKKKQSHRVFLGDPRTISIMTPLLLSPDAETQEHIVTTF
FNLSIHEPNKTLIAQQGAIQPIVQVLCCGATAAARENAAATLFSLSAVDENKATIGESGA
IPALVDLLRDGKSAGGRKDAASALYNLCLRHENKATTVRTGVVSVLMGLIADPNDAMRDP
ALAILSLLSSHHDGVHAISAATPDHVAVLMEFVKGGSRHNMENAIVIIVALCSNDPSILT
ALKSSNDYTQALVSLSVTGSSRARRKATVLMERINNQIRSATI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagaaatggcggagcggagctcaagaaggagttgaggagattagtgggtttg
gtcattcaggaagaggagggaaatgggggattgattactgttgaggtttttgataagatt
ggcgctcttttgaaggatctcagagagttgaaatttgggcgggcggcggaattgaggcgg
tcggattttgttggccgggttgaggaggtgtctgcttgctcggattcgcttcctgtgccg
cctgactattttctctgcccgatctcttctgatatcatgcgggatcctgtcatgcttgcc
actggtcagacgtacgaccgaccatacatccaagcatggctagatgcagaccatagaaca
tgcccaaagacgcaacaagtcctaccaaatctgatcctaacacccaactatctagtccgc
agcatgatcgagcaatggtgtgaaacccacggcatagactacccacacagcaaagaacct
ccagggggagccccaggtctaatggcgccccacgaggtaaagtacgtgagcctcctcctc
gacaagctagcgggaaaattccagtcacagcaacgagaagcagcaaaggagctccgagtc
ctcacaaaaaagaagcaatcccaccgggttttcctaggcgacccacgcacaatttcaatc
atgacaccgctcctgctgagcccagatgcagaaacccaagaacacatcgtcacaacattc
ttcaacctctcaatccacgagcccaacaagactctcatcgcccagcaaggcgcaatccag
cccattgttcaagtcctctgttgcggcgccaccgccgccgccagagaaaacgccgccgcc
acgctcttcagcctctccgccgtggacgaaaacaaggccaccatcggcgagtcgggcgcc
attccagctctcgtcgacctcctccgcgacggcaaatccgccggcggtcgaaaagacgcc
gcatcggctctctacaatctgtgcctccgccatgagaacaaggccaccacggttcgaacc
ggtgtcgtgtcagtgctcatgggtctgattgctgatcccaacgacgccatgcgagacccc
gcattggcaattctgtcgcttctgtcgtcccaccacgacggcgtccatgcaatttcagcc
gccactccggaccacgtagcggtgctcatggaattcgtcaagggcggctcacgacacaac
atggagaacgccatcgtcattatcgttgctctctgtagcaacgatccctccattttgacg
gcgctcaagagcagcaatgattacacgcaggcactggtcagtctcagcgttacgggctct
tccagagcccgccgcaaagcgactgtgctcatggaacgaatcaataatcaaattcgttcg
gctacaatttga
DBGET
integrated database retrieval system
