Cryptomeria japonica (Japanese cedar): 131048310
Help
Entry
131048310 CDS
T10556
Name
(RefSeq) RHOMBOID-like protein 10, chloroplastic isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjf01002
]
131048310
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
131048310
Peptidases and inhibitors [BR:
cjf01002
]
Serine peptidases
Family S54: Rhomboid family
131048310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF1751
S-methyl_trans
Motif
Other DBs
NCBI-GeneID:
131048310
NCBI-ProteinID:
XP_057838197
LinkDB
All DBs
Position
3:168086163..168165908
Genome browser
AA seq
337 aa
AA seq
DB search
MAMFSSFQWGWAGPPNSVCPHGSRSLLRMASAIELHAARFQVKYSHIFASFQESYSFQID
TKNTTLCNKNGNGLYKEFGILDRFSRTYLFFPSRCMPNLCNKAHQRSLQKARGGIPGSMQ
SSTEHRPSGRVCTNILLALNILLYVGQIVSRGKVTFWGAKVNSLINDGQTWRLVTSSFLH
ANVVHLLVNCFSLNSVGPMVEELLGPKRFFAVYMASAITSATMSYYLNKASSLGASGAIF
GLVGSLAVFNFRHKNLSSRGWESLIEIALNIAANMVLGHLSQGIDKWGHVGGMIGGASLS
WLIGPAFSYESVEGGRNRVLVDKPPISFLLGLGRHPK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttctctagttttcaatggggatgggcaggtccacctaattccgtctgccca
catggctctcgcagcttgttaagaatggcctctgccattgaattgcacgcagctcgattt
caagtgaagtattcgcatatttttgcaagttttcaggaatcttacagttttcaaattgac
accaaaaacaccacattgtgcaacaaaaatggcaatggtttgtacaaggagttcgggatt
ttggataggttctcaagaacttacctattttttccttcacggtgtatgccaaatctttgc
aataaagcacatcagagaagcttgcagaaagcaaggggtggaatacctggttcaatgcaa
tcttctactgaacatcgtccaagtggaagagtttgtactaacatccttcttgctttgaat
atattgctttatgttggtcagattgtatctcgaggaaaggtcaccttttggggagctaag
gttaatagtttgataaatgatggtcaaacgtggagacttgtgacttcatcatttcttcat
gcaaatgttgtccatctcttggttaactgtttttctctgaattcagttggtccaatggtg
gaggaattacttgggcctaagagattttttgcagtttatatggcttctgccatcacaagt
gcaacgatgagttactatctcaacaaggcatcttctctaggtgcttcaggagcaattttt
ggtcttgttggctctttggctgtttttaattttagacacaaaaatctctcaagtcgtgga
tgggaaagtttaattgaaattgctttaaacattgcagcaaacatggttttaggacatcta
tctcaaggaatagacaagtggggtcatgtgggagggatgattggtggagcttctttgtca
tggttaatagggcctgcattttcatatgagtctgtagaagggggaagaaatagagtcctt
gtagacaagccacccatttctttcttacttggtttgggaaggcaccctaagtag
DBGET
integrated database retrieval system
