Cryptomeria japonica (Japanese cedar): 131048350
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Entry
131048350 CDS
T10556
Name
(RefSeq) SAC3 family protein B
KO
K23719
nuclear mRNA export protein SAC3
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131048350
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
131048350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Phage_Arf
Motif
Other DBs
NCBI-GeneID:
131048350
NCBI-ProteinID:
XP_057838261
LinkDB
All DBs
Position
8:complement(199101110..199167412)
Genome browser
AA seq
1520 aa
AA seq
DB search
MAFKSFVGNSGPVAPPKKSISFGSSDQSPPRPSNIPGRTSPSPPRSRPKPRNSPSPPHEA
LKPRPRARSSSPTPPPLNDDEHQREIEAKARRLARFNTELSEPIRSSSPPLGRQQQQQQQ
QQLNPLQKKEVDETMDCEDSEPILGSCPDMCPESERGERERKGDLDKFERLHGDRNLTDK
SLAVKKYNRTAEREASLIRPLPVLQMTMDHILTLIDRSYDDEFLSIYNFLWDRMRAIRMD
LRIQHIFNQDAITMHEQMIRFHIVAMHELCEYTKGEGFSEGFDAHLNIEQMNKASVELFQ
MYDDHRKRGNPILTEQEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTSEMRNTKEVLFA
REVARASRSGNYIAFFRLARRATYLQACLMHAHFAKLRTQALASLHSGLQKNQGIPAAQV
VKWLAMEGEDTEGLFEYHGFSLKQFEDLYMVKEGPFLNGDVDFQTKCSQLVHQKRSDKIL
HDVISPGQVPEMDGTLQTIRSLDAQVDKLSKRAIYPNIPAFNSSVPPEEEMPDYEEDVLP
IDGEKFKDWEMQEPFGSQQTKKFEEADKLEMRSPRPIFGGEPVIPRSGARKHTIHQSKPL
QEQRVKKLRRNVPELELEIKKSFFPLKEHFGNFIEREDARGPIVHDINEMHRIETVKDWT
AVEEPNDQDEKAKLAIWKAEVEVAKLKLLLRRWKRQASKIAESRHMRRLKANAALNSLLV
GPPVRSNKKIVCHEERLGGIQNLSMVELNIDQIVRERYNMHTRMWSKLDVPEVIGPILSQ
KNPQAMCLCWKLVLCSRIDDKSCTNSSQIVGQWLRFKMMGNDKTDREQSSVSISEVATTE
RRDSNRLFCLSILRDVSFNVDRLENEEASLGASGLLFLLVDKVHWDLERGRLQSLVGSVK
PGSCLPLLILSSVNVEISTIENQLELQKLDRMRIGSWSVILVTENEHDNAKGFLSDDCLR
KGLLWLADHAPQQPNVYPSDVRNLVLESLEPYLNILLNANPLEVTPGYCIHAFNQALNET
ESDIVLAAQNSLPGWPAPEIKDLDVRVEGGYLESYMPKSGWNMGFNIDAIVHALRLCRLP
ELSSFDLNPIFCGVGSQEFGDEIQERKLTLQKYLYQYLCQISFANKGDLLTLKEADLMVQ
NHTACECINSRHVIVPEWATIFRRIYNWQLMLLESEPAAIVYVSRPRKIGLLVDELKQHL
LSSVRQIFMTSDRAYQVTPSLNEMLESSCKVISRAQGLEPNVQTGKVRYQQHAKDTTPEC
TLKNSFIDFAKNSYGQKQHLPSPVYQIFMTSEHAYQVASSSNEMVESSCKVISRGPSSES
SVQTVKDQYQQHAKNSSPESMVKNAFIDFANNSYGQQKFASRQNNPLMEFSESAEHIAME
VESQIPDSDEVRHQIEFGQTDGELQLNQVLTDFCEKVNEQKQRIASLIEETNMADCSPKL
NRAPTLCISKEEKSAYKEIRRSQGWGFECLSSNAIDCRSAVSLSPRSNSNAMDKLSNLLE
QCSAVQISLDKKLVGHFGEK
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaagagctttgttgggaattcaggtcccgtggcgcctcctaaaaaatccatc
tccttcggctcttctgatcaatcccctcctcgcccttcaaatattccaggcagaacttct
ccatctccaccgcggtctcgacccaaacccaggaattcaccttctccacctcatgaagcc
ctgaagccaaggcccagagccaggtctagctctcccactcctcctcctcttaatgatgat
gaacaccaaagagaaatcgaagctaaggcgaggaggctggctcgtttcaataccgagcta
agtgagccaattcgttcttcttctcctccgttgggacgtcagcaacagcagcagcagcag
cagcaactgaatcccctgcagaagaaggaggtggatgagaccatggactgtgaagattca
gagcccattctgggatcctgcccagatatgtgcccagaatctgaacggggagaacgtgaa
cggaaaggtgaccttgacaaatttgagcgcttacatggagatagaaacctgacagacaaa
tcccttgctgtgaaaaagtacaatagaacagccgaaagggaagcttcattgatacgacca
ttgccagttttgcaaatgaccatggaccatattcttactctcattgaccggtcctatgat
gatgaatttttgagcatctacaacttcctgtgggatcgaatgagagcaattcggatggac
ctcagaattcagcacatttttaaccaggatgctataacaatgcatgaacaaatgatacga
tttcatattgtagctatgcacgagctatgtgaatatacaaaaggagaaggattttctgaa
ggctttgatgcacacctcaacatagaacagatgaataaagcatctgtagagttgtttcaa
atgtatgatgaccatagaaagcgtggaaatcctattcttactgagcaggaatttagaggc
tactatgcactcctaaagctagacaaacatcctggatacaaggtcgaacctgcagagctg
tctcttgacctggcaaagatgacctctgagatgaggaacacaaaagaagttttatttgcc
cgagaggtagcaagagcttctaggtcgggaaactatatagctttcttccgacttgcaaga
agagcaacttatttgcaggcatgcttgatgcatgctcattttgctaagttgcggactcaa
gcactagcttcattgcacagtgggttacagaaaaatcaaggtattccagctgctcaggtt
gtgaagtggttagccatggagggagaggatactgaaggcctttttgaataccatgggttt
tcccttaagcagtttgaggatttatatatggtgaaagaaggcccattcttgaatggcgat
gtagattttcagacaaagtgttcccagcttgtacatcagaaaaggtctgataagatactc
catgatgtgatttctccaggtcaggtgccagaaatggatggcactttgcagacaattaga
agtttggatgctcaagttgacaaattatcgaaaagggccatatatcctaatatacctgca
tttaattcctctgttcctcctgaagaagagatgcctgattatgaggaggatgtcctgcct
attgatggtgagaagtttaaagattgggagatgcaagaaccatttggaagtcaacaaacc
aaaaagtttgaggaagcagataaactggaaatgaggtccccaagaccaatttttggtgga
gaacctgtcataccccgttctggagcaagaaagcataccatacatcagtcaaagccactg
caagagcagcgagtaaagaaattacgtagaaatgttcctgaactagaattggaaatcaaa
aagagtttctttccattgaaggaacattttgggaatttcattgaaagggaggatgcaaga
ggaccaatagttcatgatattaatgaaatgcatagaatcgagacagtaaaggattggact
gcagttgaagaaccaaatgaccaagacgagaaagcaaaactggccatatggaaggctgag
gttgaagttgcaaagttaaagcttcttctgaggaggtggaagcgtcaggcatcaaaaatt
gcagagagtagacatatgcgacgattgaaggccaatgcagctttgaattcactcttggtg
ggccctcctgttcgatctaataaaaagattgtgtgccatgaggagcgtttgggaggcata
cagaacttatcaatggtagagcttaacattgatcagattgtaagggaaagatacaacatg
cacactagaatgtggtcaaaactggatgtaccagaagtaattggacctattctgagtcag
aaaaatcctcaggccatgtgtctttgttggaagttagttttatgttctcgaattgatgac
aagtcatgtacaaattccagccaaattgtcggacaatggttgcggtttaaaatgatgggt
aatgataaaacagacagggaacagtcatctgtctctatctcagaagtggctacaactgag
cgtagagactctaatagattgttttgtttgtctatattaagagacgtttccttcaatgtt
gacagacttgaaaatgaggaagctagcttaggagcaagtggccttctgtttctgttggtt
gataaagttcactgggatcttgagagaggcaggctgcagtctcttgtagggagtgtgaaa
cctggttcttgcttgcctctccttatattgagctctgtaaatgttgaaataagcaccata
gaaaatcagttagagcttcaaaagttggataggatgaggatcggtagctggtctgtcatc
cttgttacagagaatgaacatgacaatgccaaaggattcctcagtgatgattgtttaaga
aagggtttattgtggttggctgatcatgctccacaacaacctaatgtttatccctctgat
gtccggaatctggttctggagtcattggaaccttatttgaacattctcttaaatgcaaat
cctttagaggtaacacctggctattgcattcatgcttttaatcaggcactgaatgaaact
gaaagcgatattgttttagcagcacagaacagtcttcctggctggcctgctcctgaaata
aaggatcttgatgtgagagtagaaggtggatatctagagtcatatatgcctaaatctgga
tggaacatgggttttaatattgatgctattgttcatgctcttaggttatgtagactccct
gagctttcttcattcgacttgaatcccattttctgtggagttggttcgcaagaatttgga
gatgagatccaagaacgaaaactcactcttcagaagtacttgtatcaatatttgtgccag
ataagctttgcaaacaaaggtgatttactgacattaaaagaagctgatttaatggtacaa
aaccatactgcctgtgagtgcattaattcaaggcatgtaattgttcccgaatgggctacc
atatttcgcagaatttacaactggcagttgatgctattagagagtgaacctgctgctatt
gtttatgtttctcgtccacgaaaaattggcttgttggtagatgaactaaagcagcatctt
ctttcttctgtacgtcaaatctttatgacctctgatcgtgcatatcaagttacaccttca
ttaaatgaaatgttggaatcaagttgcaaggttatctccagggctcaaggcctggagcct
aatgtgcaaactgggaaagtccgataccagcagcatgcaaaggatacaactccagagtgt
acgttgaaaaatagtttcatagattttgccaaaaactcatatggtcaaaagcagcatctt
ccttctcctgtatatcagatctttatgacctctgagcatgcatatcaagtggcctcttca
tcaaatgaaatggtagaatcaagttgtaaggttatctccagaggtccgagctcggagtct
agtgtgcaaactgtgaaagaccaataccagcagcatgcaaagaactctagtccagaatct
atggtgaaaaatgctttcatagattttgccaataattcgtacggtcaacagaagtttgca
tctagacaaaacaatcctctaatggagttttctgaatcagcggaacatattgcaatggaa
gtggaatcccagattccagatagtgatgaggtgcggcaccagatagaatttggtcagaca
gatggagaacttcagcttaatcaggtattaactgacttctgtgagaaggtaaatgagcaa
aagcagaggattgcttcgctaatagaagagacaaatatggcagattgttcacctaaattg
aatcgagcacctactctatgtatatcaaaagaagagaaatctgcttataaagagatcaga
agatcacagggttggggttttgaatgtctatcctctaatgccatcgattgcaggtcggct
gtttctttatcacctaggtcaaacagcaatgccatggataagttgagtaacttgttggag
cagtgcagtgctgttcaaatctctctcgacaagaaattagtaggccattttggcgaaaaa
taa
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