Cryptomeria japonica (Japanese cedar): 131048658
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Entry
131048658 CDS
T10556
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131048658
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
131048658
Transfer RNA biogenesis [BR:
cjf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
131048658
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GFIT
Motif
Pfam:
RNB
WHD_RNase_II
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
131048658
NCBI-ProteinID:
XP_057838680
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Position
1:complement(35789827..35898709)
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AA seq
823 aa
AA seq
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MTPKSLPTFDIDMASRLMNTPSIFLHSASPAISLSHFPVRRGLCHSVAMSSSSLTLSLAV
PTHCMPVELRWKRSSVAFRPLARFEPRLYSTLGLFELIKREVKAMQLNANRVRSTPRNVL
SSKEEVLLNTEIKKHDLEKGILLEFQKDSNKTLLAVVQKPDGKKNWMVSDQNGVTFSIKP
QQIKYIIPGTKDFEPADIADFLHRAKHLLDPSLLECAWEELLENEQIVNAEGLAEIIYGK
TDPLESYCAHVLLSQDEVHFKVRESKGYSSVYEPRSLSQVDELSQRKEAKESYQRELEAF
ICVLKSAKEQPIHAKPSKYSWQADDKIQHRIEALEAFALDACKSDEQKRTATEVLKALGI
PRFSSSAVDLLINIGYFPVHVNLELLKFEIPTKHSDEVLSLVSDILEHSLPDQDEHFRKD
LTYLKVYAIDVDEADELDDALSAEKLPDGRIKVWIHVADATRWVDHNSILIKEAKSRATS
VFLPTETIPMFPLKLAMEKMSLKQGIVCNTVSISVVLNEDGSIAEHNIEVATIRPTYMMT
YDEASELLFLGIEEEPELGLLSEAAVLRLKWRLKQGAIDTPMIDARVKVPNPDDPEPIIN
LYLHDPTSPAMRLVSEMMIMCGEAIAKFGGEHGIPLPYRGQSQSSLAAASLSYLPEGPAR
SSAYVRSMRRVEMDFRRPIPHGSLRVPGYVQFTSPIRRYVDLLAHYQVKAHLRGEMPPFT
STQLEGIMPTINMQVRISRRICNNSVRYWILEYLRRQPKGKEFRALILRFVKDKIATLLL
LEVGIQGSVEVYSGAQVGDEIMICVLEAHPRKDTLSFEEVNTL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaaaatctttacccacatttgatatcgacatggcctctcgtctgatgaataca
ccatccattttccttcattctgcatctcctgctatttctctttctcatttccctgttcgg
cggggtctctgtcattccgtagccatgtcctcttcttcactcacgctttcattagctgtc
cccactcattgcatgcccgtggaattgagatggaagcgctccagcgttgcatttcgtcct
ttggcgagattcgaacctcggctctactcgacgctaggactgttcgaattgataaagaga
gaggtcaaagccatgcaattgaacgcaaaccgtgttcgttctactcccaggaacgtgttg
tctagcaaagaggaggttttactcaacacagagatcaaaaaacatgatttagagaaagga
attttgttggagtttcagaaggattccaacaagacacttttggcagttgtacaaaagcca
gatgggaagaaaaattggatggtttctgatcagaatggagtaactttttccataaagcca
caacagattaaatatatcattccaggcaccaaagacttcgagcctgcagatattgctgat
tttcttcacagagctaaacatcttttggacccttcacttctagagtgtgcgtgggaagaa
ctcttggaaaacgaacaaatagtcaatgcagaaggattagcagagataatctatggtaaa
accgaccctttggaaagctactgtgctcatgtcttgttatcacaagatgaagttcatttc
aaggttcgggagtcgaaaggttattcttctgtatatgaaccacgatctttatcacaggtg
gacgaacttagccaaagaaaagaagccaaagagtcttatcagagagaattggaggccttt
atatgtgttctgaaatctgccaaagaacaacctattcatgccaaaccttcaaaatactct
tggcaggcagatgataaaattcaacatcgaatagaagctcttgaagcttttgctttggat
gcttgcaaatctgatgagcaaaagagaactgctactgaggtattgaaggctttggggatt
ccaaggttctcatcttctgcggtagacctattgataaacattggttactttcctgtccat
gtcaatctcgagcttttgaaatttgaaatccctacaaaacattcagatgaagttctttct
ctagtcagtgatatcctggagcattctcttcctgatcaagatgagcactttcggaaggat
cttacatatttgaaagtttatgcaattgatgtagatgaagctgatgagctagatgatgca
ctgagtgcagaaaagctaccagatggccgcataaaagtttggatacatgttgctgatgca
acacgttgggtggatcacaatagtatattaatcaaagaggcaaagtccagagcaacatct
gttttcttacctacagaaaccattcccatgtttcccttaaaacttgctatggaaaagatg
agcctcaaacagggcattgtttgtaatacagttagcatatcagttgttctgaatgaggat
ggaagtattgcagaacataacatagaggtcgctacaattagacctacatatatgatgact
tatgatgaagcatcagagttacttttcttgggcattgaagaggaaccagaattgggattg
ctttctgaagctgctgttctccgtttgaaatggcgacttaaacagggagctattgataca
ccaatgatagatgcacgagtcaaagttcccaatccagatgatccagagcctattatcaac
ttataccttcatgatccaacaagtccggcaatgagacttgtttcagaaatgatgataatg
tgtggggaggctattgcaaaatttgggggagagcatggcattcctcttccttatagagga
cagtcgcaatctagtctagctgctgcttccttatcctatctaccagagggacctgcacga
agctcagcttatgttaggtcaatgcgtcgagtggaaatggacttcaggaggcctattcct
catggaagtttgcgtgtccctggatatgtacagttcacatcaccaattcgacgctatgtt
gatcttcttgctcactatcaggtgaaggctcatttgagaggagaaatgccccccttcaca
agtactcagttggagggaattatgcctacgattaatatgcaagtacgaatttctaggagg
atatgtaacaatagtgttcgttattggattttggagtacctccgaaggcaacctaagggg
aaggaatttcgtgctttgattcttagatttgtgaaagataaaattgcaacattacttctt
ctggaggtaggaattcaagggtctgtggaggtctattcaggggctcaagttggagatgaa
ataatgatatgcgtgcttgaggctcatcctcgaaaggacacattgtcctttgaggaagta
aacacattatga
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