Cryptomeria japonica (Japanese cedar): 131048853
Help
Entry
131048853 CDS
T10556
Name
(RefSeq) sister-chromatid cohesion protein 3 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjf03036
]
131048853
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131048853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
HEAT
Cnd1
PDS5
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
131048853
NCBI-ProteinID:
XP_057838910
LinkDB
All DBs
Position
1:684899876..685011518
Genome browser
AA seq
1308 aa
AA seq
DB search
MASSDTESREQSLSSRGDDLSDMVGVGMITRKRAAEQQSVHPQKRSRAGLSDVNRTNAGG
QVLSESEGGTDSSFQHTPPSHFNSGRGMQNSNVDATVDGAASLSGRVLGGKVKETGAKRK
KSFQGGHDPVNDMSLIDVIKNHGKLVPQAAKNWVERYEVDSKAALTDLLMMLFEACGVQY
QGDEGPVDEIDVDDVVVFLVNQARDGNLEDYLGSKQKDLKNFKDNLLLFWDSLVIECQDG
PLFDQLFLEKCMDYVIALSCTPPRVFRRVTTLVGLQLVTSLVTVAKTLGGQRETTQRQLN
AEKKKRKDGPRVESLNKTLSVTHEKITMAEEMMRKIFTGLFMHRYRDVDPDIRMACIRAI
GSWIVSYPSLFLQDLYLKYLGWTLNDKNPAVRKTSIAALQCLYEVDDNVPSLSLFTERFC
NRMIELADDIDATVAVNAIGLLKQLLRHQLLVDDELGTLYDLLIDESPLIRHAVGELVHD
HLICQKFSTSQSMPKGMSNDASEVQIGRLLQILREFSADPILSDYVIDAVWEEMKAMKDW
KCIISMLLDDNPRIELTEKDATNLVRVLCASVKKAVGEKIVPTADSRKGSLTKAQKEALD
NSRREVTAGMIKHYPQMLRKYLADKEKISPLVEIIMHLKLELYSLKRQEQSFMNSLQLIK
DAFFKHGEEKTLKSCVKAFTFCASESQADLQDSAQNKLKELEDELVLKLRSAIKQAGVSE
DEYSLTVNLKRLYQLQLLKFVSSESLFADVLCLVKDFNNLDDEVIRLVLLNMHLHVTWSS
RSIEIDNPSDTGMVAFLSKRDNLISQLEYFTDNVLESCEQGAARSELTSTICVILADLWS
LFSEAKLNLTKQQCLGFCPSEAMLKKFWKLCEYRLNAADDDEEEEDSNEHVDEINQKDVV
MSAAAKLVAHEMVPKDFLGAEIISHFILHGGIVAETVKHLITLLKKNSKGDDLPKMCLEA
TKRAYQRHVLEASKNDEDWTTSKSFLQCKELASRLSATFLGSARDKHKPNILKIVNEGIE
YAFKDAPKQLPFLEGGVLQFALKLPLPDVQEIIKHVQKRVEGINTDEDPSSWRPYFTFVD
YLQEKHLKNEGVYGEREASVAKHHIPRPKKAKAVKGKILFEGQDSTDDEDAHSESDQEDA
EAEDDDTPLSHVRQASKFVNVKATKTESAEKARRTLPKIPGKSLRETRTDTSESAQPESG
SIGAEVNVAHDLFASATEEQLPIGLGRQSQFVHSGLRAEKTPAGGVNTRAAPRNFNSGDY
GKTMSSSSAEDHSRVSKEYLSGQNVSKTFLSSSEDIDDEFVGARRLRL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcggacacagaatctcgagaacagagtttaagtagcagaggggacgatctt
tcagacatggtgggggtaggcatgattacacgtaagcgtgctgctgaacagcagtcggtt
cacccccagaaaaggtccagagctggtctttcagatgtgaatagaaccaatgcaggtggt
caggttctatcggagtcagaaggtgggacagattcttctttccagcacacacctccttct
cactttaatagtgggagagggatgcagaattcgaatgtggatgctacagttgatggtgct
gctagcttgtcagggcgagtccttggtggaaaggtcaaagagactggagccaaaagaaaa
aaatcttttcaaggaggacatgatccagtcaatgatatgagtttaattgatgttatcaag
aatcatggaaagcttgttcctcaggctgctaagaattgggttgagaggtatgaagtggat
tcaaaagctgccttgacagatttattaatgatgctctttgaggcatgtggagttcaatac
caaggtgatgaaggccctgtggatgaaattgatgtggatgacgtggttgttttcttagta
aatcaggctagagatggcaatctagaagattatcttggatccaagcaaaaggatttaaag
aatttcaaagataacctcctcctgttttgggacagccttgtcattgaatgccaggatgga
ccgttatttgaccaattatttttggagaagtgcatggattatgtcattgctctttcatgc
acccctccaagagttttccgtcgggtcacaacattggttggactgcagcttgtgacatca
cttgttacggttgcaaaaactctcggtggacagcgagagactacacaacgtcagttaaat
gctgagaaaaagaaacggaaagatggtccccgagtggagtcattgaataagacattgtct
gtaactcatgaaaagataactatggcagaggaaatgatgcgtaaaatatttacaggactt
tttatgcatcgatacagagatgtagatccagatattcggatggcatgtatcagagctatt
ggttcttggattgtctcgtacccttcactatttttgcaagatttatatctgaaatatctt
ggatggactttgaatgataagaatcctgctgtccggaaaacctctattgctgcactgcaa
tgcctatatgaggtggatgataatgtaccatcacttagcctttttacagaacgattctgc
aaccgaatgattgagcttgcagatgatattgatgcgactgtggctgttaatgctatagga
ctcttgaaacagttactgaggcaccagcttcttgtggatgacgagcttggcacactgtat
gacttattgattgatgagtcaccactcattcgccatgctgtgggagaattagtacatgat
catttgatttgtcagaaatttagcacctctcagtctatgcctaaagggatgagcaacgat
gcttctgaagttcaaatagggaggctgttgcaaatactgagggaattttctgcagatcca
attctcagtgactatgtcatcgatgctgtctgggaagaaatgaaggcaatgaaagactgg
aaatgtatcatttccatgcttctggatgataatccaaggattgaacttacagagaaagat
gcaacaaatcttgttcgagtcttgtgtgcttccgtgaaaaaggcagtcggtgagaagatt
gttcccacagctgatagccgcaaaggttccctcactaaagctcagaaggaagcattggac
aatagtagacgagaggtaactgctggcatgataaagcattacccacaaatgctgagaaaa
tatttagcagataaggaaaagatatcgcctttggtggaaatcataatgcatctgaagttg
gagctttattccctgaagcgtcaagaacagagtttcatgaactcacttcaacttataaaa
gatgcatttttcaaacatggagaagagaaaactttaaagtcatgtgtcaaggcattcaca
ttttgcgccagtgaaagtcaggcagacttgcaagattctgcacagaataagttgaaggag
ttagaagatgaacttgttctcaagcttagatcagccatcaaacaagctggggtttcagag
gatgagtactctctgacagttaatctgaaaaggctttaccagcttcagttattgaagttt
gtatcaagcgagagtttgttcgcagatgttctttgccttgttaaggattttaacaatttg
gatgatgaggtgatccggcttgttcttctgaacatgcacttgcatgttacttggtcatca
cgatcaattgaaattgataatccctctgacacaggaatggtagcatttctatctaaacgt
gataatcttatcagtcagctggaatactttacagataatgttcttgaaagctgtgaacag
ggagctgcaagaagtgaactcaccagtacaatatgtgtcatcttagcagacttgtggagt
ttattcagcgaagcaaagttgaatttgaccaagcaacaatgtttgggattctgtccaagt
gaggctatgttgaagaaattttggaagctttgtgaatatcgccttaatgctgctgatgat
gatgaggaggaagaggattcaaatgaacatgtagatgagataaatcagaaggatgttgtc
atgtctgctgcagcgaaattggttgcacatgagatggttcctaaggatttccttggtgcg
gagattatttcacattttattcttcatggaggaattgttgctgagacagtgaagcatctt
atcactcttttgaagaaaaattctaaaggtgacgatctcccaaaaatgtgtctagaagcc
actaagagggcatatcaacgacatgttttagaggcttcaaaaaatgatgaagattggact
acaagcaagtccttcttacaatgcaaggaacttgcaagtcggctgtcagcaacatttttg
ggttctgctcgcgataagcacaaaccaaacattctgaaaattgtaaatgaaggaatagaa
tatgcatttaaggatgctccaaagcagttaccattcttggagggaggtgttctacagttt
gctctcaaattgcctttgccagatgtgcaagaaataattaagcatgtccaaaagagagtg
gagggtatcaacactgacgaagatcctagcagttggcgtccctatttcacatttgtagat
tatttgcaggaaaaacatttgaagaatgaaggtgtttacggagaaagggaagcatctgtt
gcaaagcatcacattcctcgtcccaaaaaggctaaggctgtgaaggggaaaattcttttt
gaaggacaggactcgacagatgacgaagatgcacacagtgaatcagatcaggaggatgca
gaagctgaagatgatgatactccattgtctcatgtaaggcaagcatccaaatttgtgaat
gtaaaagcaacaaaaacagagagtgctgaaaaagcaaggcggactttgccaaagattcct
ggaaaatcgttacgagaaacaagaactgacacttcagaatcagcgcaacctgagtcagga
tcaataggtgcagaggttaatgttgcacatgatttgtttgcttctgctactgaggaacaa
ttacctattggcttgggtcgacaaagtcaatttgttcactctggtttacgggcagagaag
acaccagcaggtggtgtcaatacaagggctgctcccaggaacttcaattctggagattat
gggaaaactatgtcatcatcctcagctgaagatcatagcagagtcagcaaggaatattta
tcaggccaaaatgtcagcaaaacctttttgtcttcaagtgaagacatcgatgatgaattt
gttggtgcaagaagacttaggctgtaa
DBGET
integrated database retrieval system
