KEGG   Cryptomeria japonica (Japanese cedar): 131049285
Entry
131049285         CDS       T10556                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131049285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131049285
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131049285
Spliceosome [BR:cjf03041]
 Complex B
  Other components
   Prp19 complex
    131049285
 Complex C
   Prp19-CDC5 complex
    131049285
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    131049285
SSDB
Motif
Pfam: BCAS2 MobC_2 THOC7
Other DBs
NCBI-GeneID: 131049285
NCBI-ProteinID: XP_057839321
LinkDB
Position
10:599622876..599738895
AA seq 247 aa
MGSKQVLMLEAAPDDLRSKWRGGISDELIDALPYIDHDYADPKVKAEVDRMVEEEMHRST
KKPADFLAELPPAPKLNFENYPMVAKEYERVRAGKPPHTIDMSRYGLEPPPLSKRNDVTA
WKNALHNAQSQLQHQTIRLENLDLMMQYGTDAWKVHNQHLEAFLARVQAIGHEYGQQIEA
LNRERKFNQQTAAAELNFLEAQWKELCEKCIEIRTACAKLDINNEELRKEANEKGLSLEP
KYESRDR
NT seq 744 nt   +upstreamnt  +downstreamnt
atgggaagtaagcaagtattaatgctggaagctgcaccagacgatttgcgctcaaagtgg
aggggcggcatttcagacgaactaatagacgccctgccttatatcgaccacgactatgca
gaccccaaagttaaagctgaagtggacagaatggtcgaagaagaaatgcaccgaagcact
aagaagcccgctgattttctagccgaactgccgcccgctcctaagcttaatttcgagaat
taccctatggtggcaaaggagtatgagcgcgtacgtgctggcaagcctcctcatacaata
gacatgtctcgctatggtttagagccacctcctctaagcaagcggaacgatgtgactgcc
tggaagaatgctctccacaatgctcaaagtcaacttcagcaccaaacaataaggcttgaa
aatctagacttaatgatgcaatatggaaccgatgcatggaaagtccataatcaacatttg
gaagcattcttggccagagtgcaagccattggacatgaatatggtcagcagatagaggca
ttgaatcgtgaaagaaagttcaaccagcaaactgcagcagctgagctgaattttttggaa
gcacagtggaaggaactttgtgaaaaatgcatagaaatcagaacagcatgtgctaaactt
gacattaacaatgaagaattaagaaaggaggccaacgaaaagggattgagcttggagcca
aaatatgagagtcgagacagataa

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