Cryptomeria japonica (Japanese cedar): 131049429
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Entry
131049429 CDS
T10556
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131049429
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131049429
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131049429
NCBI-ProteinID:
XP_057839469
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Position
3:complement(759524246..759526316)
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AA seq
415 aa
AA seq
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MASRQALQPLFLLLAVFFIKLVMVESIRTPFNMTKAENSDKYHVEKPELVVQMVERSLNN
SKRKLSSCETGNPIDDCWRCDPNWVNNRKRLADCAIGFGKNAIGGKNGRFYIVTDPNDDD
PVNPRPGTLRHAVIQTEPLWIIFQKDMVIQLKEELIMNSYKTIDGRGANVHIANGACITI
QYVTNIIIHGVHIHDCKPAGNTNVRSSPTHYGFRTKSDGDGISIFGSSAIWVDHCSLSSC
ADGLIDAIMGSTAITISNSFFTHHDKVMLLGHSDAYTEDVKMQVTVAFNHFGEGLVQRMP
RCRHGYFHVVNNDYTHWEMYAIGGSANPTIKSQGNRFLAPDYRFHKEVTKHQDSTEGNWR
SVGDLMLNGAFFTASGAKESSSYAKASSMAARPSSIVGSITASSGVLTCRKGSSC
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagacaagccttacagccattgtttcttcttcttgctgtctttttcatcaag
ttagtaatggtggaatcaataagaacccccttcaatatgactaaggctgagaatagtgat
aaatatcatgttgagaagccggagcttgtagttcaaatggtagaaaggagtttaaataat
tcgaaaagaaagctgagctcgtgcgaaacggggaaccccatcgatgactgttggcgttgt
gatcctaactgggttaacaaccgaaagagactggctgattgtgccatcggatttggcaaa
aacgcaattggaggtaagaatggcagattttatatagttacagatccaaatgacgatgac
ccggtcaatcctcgacctggcactctgcggcacgctgttattcaaaccgaacctctctgg
attattttccaaaaagatatggttattcagctcaaggaggagcttatcatgaacagttat
aagactattgatggtagaggtgccaatgttcatatagcaaatggagcttgcattacaatt
cagtatgtgaccaatattatcattcatggagttcatatccacgactgtaaacctgcggga
aacacaaatgttaggagctccccgacacattatgggtttagaaccaagagtgatggagat
gggatttccatctttggatcaagcgcaatttgggttgaccactgttcattgtcaagttgc
gcagatggattgatcgacgccatcatgggttccactgctataaccatttcaaacagcttt
ttcactcaccatgacaaggtgatgctcctaggacacagcgacgcctacaccgaggacgtc
aaaatgcaagtaacagttgctttcaaccactttggagaagggcttgttcaacgtatgccc
agatgtcgacatggatactttcatgtggtgaacaatgattacacccactgggaaatgtat
gcaatcgggggaagtgcaaaccccaccattaaaagccaaggcaacagattccttgctcct
gattatcgattccacaaggaggttacaaagcaccaagattcaacagaaggcaactggaga
tcagtgggagatcttatgttaaatggggcattcttcacagcatcaggggctaaagaatcc
tcaagctatgccaaagcttcgagtatggcggcaagaccttcctctattgtgggctctatc
actgcaagttcgggtgttctcacctgcagaaaaggttccagctgttag
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