KEGG   Cryptomeria japonica (Japanese cedar): 131049470
Entry
131049470         CDS       T10556                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131049470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131049470
Spliceosome [BR:cjf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    131049470
 Complex B
    131049470
 Complex C
   U2 SnRNP specific factors
    131049470
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 131049470
NCBI-ProteinID: XP_057839509
LinkDB
Position
11:19925753..19994772
AA seq 509 aa
MSSTLLDVTRGAHEEVERLERLIVKDFQREPATNKDRLYQNHRVSNMVNSIMSTTQKLIE
IYEDKDHARKDEIAALGGQGASGQNVFGAFYDRLKEIREYHRRHPTAHIVDMLDDPEELL
KEEPQIDFSGEEAFGRYLDMHELYNEYVNSKFGQLIDYSAFLEEFPKTHNITRNHKLTRQ
YKEYLTHLLDYFISFFQRTQPLQDLDKIFSKVDDEFEDRWAGGTVHGWEDKGLGNGEPSI
LQESIDLDYYNSVDELTELGPERLKQALAALGLKTGGTCQQRAERLFLTKFTPLEQLDRK
HFAKGNWPLGRKTDQELQQQINASKEVALMEVKMQRFVELLYETLAETKANVEKKQALTY
EEMEAEREEEEIQAESESDEDDQLVYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAKVLWERIQERQGLNKWR
PDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacactcttggatgtgacaaggggtgctcatgaggaggtggagcgtttagag
aggttaatagtgaaggacttccagagagaacctgccacaaacaaggatcgcttgtatcag
aatcatcgtgtcagcaatatggttaattctattatgtctacaactcaaaaactgattgag
atatacgaagacaaagatcacgccaggaaggatgaaattgcagctctaggagggcaaggt
gcgagtggtcagaatgttttcggtgcattttatgatcgtctaaaagagatccgtgaatat
catagacggcatccgactgctcacattgttgatatgttggatgatcccgaggaattactg
aaggaggaaccccagattgatttcagtggggaggaagcatttggtcgataccttgacatg
catgagctttacaacgaatacgttaattcaaagtttggtcaattgattgattattctgca
tttcttgaagagtttccaaaaacacacaatattacccgcaatcacaaattgacaagacaa
tacaaggagtatttaacacatttgttagactatttcatatctttcttccagcgaacacaa
cctttgcaagatctggacaaaatattctcgaaggttgatgatgaatttgaggaccgttgg
gcaggtggtaccgtgcatggatgggaggataagggattaggaaatggagagccttcaata
ctacaagaatccattgatttggattattataattccgtggatgaactgactgagctaggt
ccagaaagattgaaacaggcattggcagcgctggggttgaaaacaggtggtacctgtcag
caacgtgcagagaggctctttttgacaaagttcactcccttggagcagcttgatcgaaag
cattttgcaaagggcaactggcctttgggaagaaaaacagatcaagagcttcaacagcag
attaatgcatcaaaagaagttgctctaatggaggttaagatgcaacggtttgttgaactt
ttatatgagacgcttgctgagaccaaagcaaatgttgagaaaaaacaagcattgacatat
gaagaaatggaagcagagcgtgaagaggaggaaatacaagctgagagcgagagtgatgaa
gatgatcagctagtttacaatcctttgaaattacctatgggatgggatggaaagccaatt
ccatactggctctataaacttcatggtctgggtcaggagttcaaatgtgaaatatgtggc
aaccacagctattggggcagaagggcctatgaaaggcattttaaggagtggcgtcatcag
catggaatgcgttgccttgggataccaaacacaaagaacttcaatgagataacctcaatt
aaggaagcaaaggttttgtgggaaagaatacaggagaggcaagggcttaacaaatggcgg
ccggacctagaggaagaatatgaggatcaagaggggaacatctataacaagaagacttac
actgatctgcagcgacaaggactgatttaa

DBGET integrated database retrieval system