Cryptomeria japonica (Japanese cedar): 131049575
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Entry
131049575 CDS
T10556
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131049575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131049575
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131049575
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
HECT type E3
131049575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
Arm
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
131049575
NCBI-ProteinID:
XP_057839619
LinkDB
All DBs
Position
7:593762360..593769668
Genome browser
AA seq
1485 aa
AA seq
DB search
MEPFSEDFLLGSSNYQLHSILCTLQDGEADDITQIAALTNLCEILAMASEEFHVDSFIPI
LVGYLKHGSPEIKLLATRSLTYISDIFPWYCSNIVTEGAIPAMSEHLLTSYYLDLAEESV
LALEKISRRRASNCLRDGAFMALLLNLDFFSSAIKKHALSTAAEISLELSPSTIGLVMEE
VPILLGVLSDPDAKMVEHACVCLSQIARAAAASQKNLEEISNYGLVAKAISLISVTNSVS
GQASLSSPGFMAVIGLLSTCASASAVLAGQMIEMGISSILRDILNAGIVSQMTIPVFSND
STNQLQKIVSFVNDLLPSVSNEKISLPTSDERDDRDNSAREKLFQEKPELLVQFGMNLFQ
LMIQIYGLNINAQVSRQCLKVISKLLYLSTPEILKPLLQETNISRFLAGILSGKDFEISL
AALQMAEILIQKLPDIIFNMFMREGVFHAVGTLICTGSTVSGEDKTHTTWNTWSESEEES
EANQIEEIVSAHARQFKATYFVSNSGARATKGFRKLTNLCKKLDWALCDLMGKSMKAKQS
RVVYNSHYGLNGKFEGKAKQGMGISKRKGKRSCAVSDNNEIPSIIANILAELCQDDGVST
FEFVKSGVVASLLNYFAGRDLKIDKMLKADSIGHQLETMKRLETFVDISLPLIVHGKETP
LTVLVRKLQDALSSEDFPIQDNNDPLTVRLCRAQGETSVLSHPPNILYVEPLARITDIED
YLCRRLQINKTETTCTSSVAEPGTHVTTTEATTEGISTEKSRPSTTTENSTNSTLSKGES
NSSSVTTDFNDTQIRIGASMGDALEREPQLKQEQGGSIDEGLLEEPTSVCVMDGANGVLL
RDPADASGIEGSTTIRASSSSSKGSSRSREHPTLNFFIGGKLLDRSSTVYEAIQKSVQVE
GDDPSHSDSEWINESIRYEVHKITYTIANTPSERNLTETHQMCARLMKLKNLPCIGKILQ
GKLPYNIGEKDSTHDILLLLQILDEINKLAPCLRANSLSDAFAKGRLKSLHELEANGPTV
PQQEFFSGKLTPKLAYLLKDAEALATFGLPNWCNQLIENFSFLFPFEIRRQYFMFCASPK
IPPDPYLRNNDAVRLPRLKVCISRKRVLKAAAQVMHLCRGQKAALEIQYYNEVGSGLGPT
LEFYTLISHELQRSKIGMWRTNAEESVQASLGLFPRPYSPHTESSDREKFHVIENFTLLG
FLMAKALQDGRLLDLPLSRAFYKLLLGNDLDLYDIKYFDIGLGTILQEMQALAARRQYLE
SMADDKSKEISSLHYRGAKIEDLCFDFTLPGFPDYALKPGGSSIMVTIDNVDEYVSLAVD
ATIASGIMPQIEALRKGFNQVFPISTLQVFSEKELETLICGERDLWEAEMLCDHIKFDHG
YTAQCPFALDFLEIVAAFTPKLQRAFLQFVTGSPNLPPGGLSALNPKLTVVRKNPTNLTD
TLDMDLPSAMTCANYLKLPPYSTKETMRDRLVYAITEGQGSFDLS
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggagccatttagtgaggattttcttttgggaagttccaattatcagttacactctatt
ctatgtactctacaagacggagaagcagatgatatcactcaaattgcagctctgactaac
ctctgcgaaattctggctatggcgtctgaagagtttcatgtggattcttttattccaatt
ttagtagggtatttgaagcacgggagtcctgaaataaaactattggctactagaagttta
acatacatctctgatattttcccctggtattgctcgaatattgttaccgaaggtgcgatt
ccagcaatgagtgagcacttgctcacctcatattacttggatttagcagaggagtctgta
ctggcattggagaagatctctcgcaggcgtgcatctaactgccttcgtgatggtgctttt
atggcactattgttaaatctggattttttttctagtgctattaagaaacatgcattgtca
actgcggcagaaattagcttagagctttcaccatctaccattggtttggttatggaagaa
gttccgatactgttgggtgttttatcagatcctgatgctaagatggtagaacatgcatgt
gtgtgtttatctcaaatagcaagagctgcagctgcttctcaaaagaatttagaagagatt
tctaactatggcctggtagccaaagctataagtttgatatctgtcaccaactcagtcagt
ggccaggcatctcttagttcaccaggattcatggctgtgattggactgctttcaacatgt
gcaagtgcttctgctgtattggcagggcaaatgattgaaatgggcatctctagcatcctt
agggatattcttaatgctggcattgtatcacagatgacaattcctgtgttttcaaacgat
tcaactaatcagttgcagaagattgtctcctttgtaaatgatcttcttccatcggtatcc
aatgagaaaatttcacttcccaccagtgatgaacgtgatgatagagataactccgctaga
gaaaagctatttcaagaaaaacctgagcttttggtgcaatttggaatgaatctttttcaa
cttatgattcagatatatggtctaaacatcaatgctcaagttagccgccaatgtctgaaa
gttatcagcaaactattgtacctcagcactccggagattttgaagccattattacaggaa
accaacatatcaagatttttggcgggaattttatctggcaaagattttgaaatttcactt
gcagcattacagatggcggaaattttaattcagaaacttccggacattattttcaatatg
ttcatgagagaaggtgtttttcatgcagtgggtacacttatatgtacagggagcactgtc
tcaggagaggataaaactcatacaacatggaatacatggtcagaaagtgaagaagaaagt
gaagcaaatcaaatagaagaaattgtcagtgctcatgcaaggcaatttaaggctacatac
tttgtttcaaattcaggggctagagctacaaaaggttttcgcaagttgacaaatctttgt
aagaagttagattgggccttgtgtgatttgatgggtaaatcaatgaaggccaaacagagt
agggttgtatataatagtcattatggtttaaatggcaaatttgaaggcaaagccaaacag
ggtatggggatatcaaaacgaaagggtaaaagaagttgtgctgtctctgataacaacgaa
ataccatcaatcattgctaatattctggccgaactatgccaagatgatggcgtatcaact
tttgagtttgttaaaagtggggttgtggcatccttactaaattattttgcaggcagggac
ttgaaaatagataagatgttaaaagctgattccattgggcatcagttagaaacaatgaaa
agactcgagacatttgttgatatctctcttcctctgattgttcatggaaaagaaactcct
ttgactgttttagttcggaagctgcaggatgcactttcctccgaagattttcctatacaa
gacaataatgatcctctaacagtgcggttgtgtagagcacaaggagaaacatctgtgctt
agccaccctccaaatattttatatgtagagcctttggctaggatcactgatattgaagat
tatctgtgtcgtagattgcagataaataaaactgaaaccacttgtactagtagcgtggct
gagcctggtacccatgtaacaactacagaagctactacagaaggaatatctacagaaaaa
tcaaggccatcaacaacaacggaaaattctaccaattctacactatcaaaaggagaatca
aactcaagcagtgttacaactgatttcaatgacacacaaataagaattggggcttcaatg
ggagatgccttagagagagaaccacaactaaaacaagagcaaggaggatctattgatgag
ggactgttggaggaaccaacttcagtttgtgtgatggatggggcgaatggcgttttgttg
agggatcctgcagatgcaagtggaatagaaggttctacaacaataagagcatcatctagc
agttcaaaaggatctagcagaagtagggaacatcctacgctgaattttttcattggaggt
aaactgctagatagatcatcaacagtatatgaagcaattcaaaaaagtgtgcaagttgaa
ggagacgatccaagtcattcagattcagaatggataaatgaatcgattcggtatgaagtg
cataaaattacatatacgatagcaaacacaccgagtgagaggaatttgactgaaacacat
caaatgtgtgctagactgatgaaattgaagaatttgccttgtattggcaagattttgcaa
ggaaagctcccctataatataggggagaaggatagcacacatgatattctattgctgctt
caaattcttgatgaaataaacaaattagctccttgtttgagagctaacagcttatctgat
gcatttgcaaaagggagattgaaaagcctacatgaattggaagcgaatggtcccacggtt
cctcaacaagaattttttagtggcaagctgactccaaagctagcatatctgctaaaagat
gcagaggcattggctactttcggtttgccaaattggtgtaaccagttgattgaaaacttc
tcatttttgtttccatttgagataagaaggcaatattttatgttttgtgcatcaccaaag
attcctccagatccctatttgagaaacaatgatgctgttaggctaccacgcctaaaggtt
tgtatttcacgaaagcgtgtattaaaggcagctgcacaagtgatgcatttgtgccgaggg
cagaaggctgcccttgaaattcagtattataatgaggttggcagtggtctgggtccaact
cttgagttttatacacttataagtcatgaattacagaggagtaaaattggaatgtggagg
acaaatgcagaggaatcagttcaggcatctctgggattatttcctcgtccttactcacct
catacagagtcttctgacagagaaaaatttcatgtgatagagaatttcacccttcttggg
tttctaatggctaaagctcttcaggatggccgacttctggacttgcccctttccagagca
ttttataagctgcttcttgggaatgatcttgatttatatgatatcaagtactttgacatt
gggcttggaacaatactgcaagaaatgcaagctcttgctgctcgaaggcaatacttggag
tcaatggcagatgataagagcaaagaaatatcaagtttacattaccgtggtgcaaaaatt
gaagacctttgctttgatttcacccttcctggcttcccggactacgctctcaaaccagga
gggagcagcatcatggttaccatagataacgtagatgagtatgtttcattggctgtggat
gcaactattgcttcaggaatcatgccacaaattgaggcccttcgaaaagggtttaatcag
gtgtttcccatctcgactttgcaagtattttcagaaaaggaattggaaactcttatatgt
ggggagcgtgacttatgggaggctgaaatgctatgtgatcacatcaaattcgatcatggt
tatactgctcaatgtcctttcgcattggattttcttgagatcgtggcagcattcacacca
aagctgcaaagagcatttttgcagtttgttactggttctccaaaccttcctccggggggt
ctgagtgctctaaatccaaaattgactgttgttcgcaaaaatcctacaaatttaacagac
actcttgatatggatttgccgagtgctatgacttgtgcaaattaccttaaacttcctcca
tactcaaccaaggagacaatgcgtgatagactggtatatgccattactgaagggcaagga
tcttttgacctctcataa
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