KEGG   Cryptomeria japonica (Japanese cedar): 131049636
Entry
131049636         CDS       T10556                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131049636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131049636
Spliceosome [BR:cjf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131049636
 Complex B
    131049636
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus PCF11_charged DNA_alkylation zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 131049636
NCBI-ProteinID: XP_057839680
LinkDB
Position
8:complement(658638759..658643123)
AA seq 300 aa
MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCARLHNRPTISPTLLLSNMYQRPDMIAA
PGGLDPATSSDPNQVAAAAADPRKTQRHFEDFYEDIFEELSKYGEIENLNVCDNLADHMV
GNVYAQFSQEEQAAAALQALQGRFYAGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCN
FMHVKKINKDLRRKLFGRVGRKFNRRSRSRSRSRSRSRSRSLSPRSHGGRSGYAKGRDFE
NFDRRREPRGRFRGSFGGRGGGQGHRRHRSPPAREGSEERRAKIEQWNREREERDTANQG
NT seq 903 nt   +upstreamnt  +downstreamnt
atggcggaacatttggcgtccatattcggcacggaaaaagacagggtaaactgccccttc
tatttcaaaatcggtgtgtgtagacacggcgatcgatgcgcccgcctgcacaaccggccc
acaataagtcctaccctcctcttatcgaacatgtatcagaggcccgatatgatcgctgcc
ccaggaggactcgatcctgcgacctcctcggaccctaaccaggtcgccgcagctgccgca
gatccacgcaagactcagcgccacttcgaagacttttatgaagacatttttgaggagctc
agcaagtatggggagatcgagaaccttaatgtgtgtgacaatctggcagatcacatggtt
ggaaatgtttatgcccagtttagccaggaagaacaggcggccgcggccttgcaggcttta
cagggaaggttttatgcgggaaggcctatcatcgtcgatttctcccctgttactgatttc
cgcgaggccacttgcaggcaatatgaagaaaattcctgcaaccgaggtggctattgtaat
ttcatgcatgtgaagaagattaacaaagatttgagaagaaaattatttggcagggtaggt
aggaagtttaacaggcgtagcaggagcaggagcaggagccggagccggagccgcagccgg
agccttagccctcggtcacatggtgggcgttctggttatgcaaagggtcgggattttgag
aactttgaccgccgccgagaaccaagaggcaggttcagagggagctttggtgggaggggt
ggtgggcagggtcataggcgtcaccggagcccaccggctagagaaggcagtgaggagagg
cgggctaaaattgagcagtggaacagagaaagagaagagcgagatacagcaaatcagggt
taa

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