Cryptomeria japonica (Japanese cedar): 131049957
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Entry
131049957 CDS
T10556
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131049957
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
131049957
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_5
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
131049957
NCBI-ProteinID:
XP_057840052
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All DBs
Position
8:244606828..244619131
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AA seq
640 aa
AA seq
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MDGRFSGLKPKRPLTGAEDNGHRSKRFQASQAEKGDIAFKILCPEAKAGGVIGKGGSIIS
QIRRETGARISVQETVEGCEERVVLISAPAEGDQHSGFYGAVERPSPAQDALLSVHAKIA
EDMAAEKDANGVVITRMIVPNNQVGCLMGKGGKIIQQMRDESKAQIRILPRDQNPKCADP
TDEILQIQGNLNVVKKALWLVSMRLKDNTSKEATQPPPISSFVYSPDYNATSRDAYMPYQ
NSADHFRNLDGHASAMISSVGFNRGLDSALGHPTSGYMLPEGGRSLASDQGPSSSGEELV
FRVLCPNKKIGGVIGKGGTIIKSLREEIGVKIKVTDSVPGSDDRIIIISSNESPDDNLSP
AQEALLHIQSQIVDLGPDKDSVITTRLLVPANQVGCLIGKGGSIISEMRRATGANIRILP
RKDLPQCALETDELVQIVGDIRVAREALIQTTSRLRANLYPDRSASEVLPSSSFGSMATL
SGRGRLEPVSPSRSYPSSMAFQGGRSSSSYLTLPPSPGPWSSKVSLHSKPDMGRMGNFTD
YEEPIVRKGGSSVFGRSTSGLITKTTVEVVVPEHVIVALLGKSGTGLSQIRQISGAKVNL
LDVRPGSSEGVVEISGTPEQTHAAQCLIEAAGINKKPLFG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaggttttctggattgaagccgaagcggccgttaactggagcggaggacaat
gggcatcgctccaagcggtttcaggcgtcgcaggcagagaagggagatatagcgtttaag
attttgtgccccgaggcgaaggctggaggcgttataggaaaaggaggcagtattatatct
caaatacggcgtgaaacaggggcccggataagtgtgcaagagacagtggaaggttgtgag
gaaagggttgtacttatttctgcgccagccgagggagatcaacattctggtttttatggg
gccgtcgagaggccgtcacctgcgcaggatgctctgctcagtgttcatgccaagattgcc
gaagatatggccgctgagaaagatgccaatggcgttgtcattactcgcatgattgttccc
aataaccaggtgggctgtctcatgggaaagggtgggaagattatccagcaaatgagggat
gaaagcaaggcgcagattaggattttgcccagagaccagaatccaaaatgtgctgatccc
acggacgagattttacagattcaaggcaacttaaatgttgtgaagaaagcattatggctt
gtttcgatgcgattgaaagacaacacctcaaaggaagccactcagccacccccaatttct
tcttttgtttattctccagattacaatgctacatctcgagatgcttatatgccgtatcaa
aattcagctgatcatttccggaatctggatgggcatgcctcagcaatgatatcatctgtt
ggttttaacaggggccttgattcagcactgggacacccaacctctggttacatgcttccc
gagggtggtagatctcttgcaagtgatcagggtccttcttcatcaggggaagagcttgtt
ttccgtgttctttgcccaaataagaaaattggtggtgtaataggaaaaggtggaaccatt
attaaaagcttacgggaagagattggtgtgaaaatcaaagttactgattcagttccaggg
tcagatgaccgaattattattatttcatcaaatgagtccccagatgacaatctgtctcct
gctcaggaagctttgttgcatattcaaagtcagattgtggatttgggaccagataaagat
agtgtaatcacaacaaggcttcttgttccggccaatcaagttggttgtttgattgggaaa
ggtggttctataatttctgaaatgaggagagcaactggtgcaaatattcgaattttaccc
agaaaagaccttccacaatgtgccttggaaacagatgagcttgttcagattgtaggtgac
atacgagtggcacgagaagctttgattcaaacaacttcaaggttgcgtgccaatttgtat
cccgataggtccgcctctgaagttcttccttcttcatcctttgggagtatggcgactttg
agtggtagaggaaggcttgaacctgtatctcctagtagatcctacccatctagtatggca
tttcaaggtggccgttcatcatcaagctatctgacattgcccccttcaccaggtccatgg
tcatcaaaggtcagcttacattcaaagcctgacatgggaagaatgggcaatttcacggac
tatgaagaaccgattgttcgcaaaggtggatcttctgtatttggaagatctacttctgga
cttatcacaaaaactacagtcgaagtagttgtaccagaacatgttattgtggccctttta
gggaagtctgggactggcctttctcagattcggcagatatcaggtgccaaagttaatctt
cttgacgtgagaccaggatcatctgaaggagtagttgaaatatcaggtactccagagcag
acacatgcagcccagtgcttgattgaggcagcaggcattaataaaaaaccattatttggt
tga
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