Cryptomeria japonica (Japanese cedar): 131049973
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Entry
131049973 CDS
T10556
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131049973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjf02000
]
131049973
04147 Exosome [BR:
cjf04147
]
131049973
04090 CD molecules [BR:
cjf04090
]
131049973
Enzymes [BR:
cjf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
131049973
Transporters [BR:
cjf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
131049973
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131049973
CD molecules [BR:
cjf04090
]
Proteins
131049973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
SMC_N
AAA_21
AAA_15
AAA_23
AAA_22
Zeta_toxin
AAA_16
RsgA_GTPase
nSTAND1
APS_kinase
DUF87
AAA_28
Motif
Other DBs
NCBI-GeneID:
131049973
NCBI-ProteinID:
XP_057840073
LinkDB
All DBs
Position
2:175469126..175566020
Genome browser
AA seq
1398 aa
AA seq
DB search
MMSKGFFGWSPPHIQPLTPVSEVSEPPESPLPNFVEGAQIPDDDEGLIDFTEEEMDPPPA
AVPFLRLFAHASAFDWFLMVLGSLAAAAHGAALVVYLHFFGQIIDLFTLLGPPFERHELY
HNFTKHALYIVYIAAGVFVVGWIEVSCWILTAERQTAVIRAKYVQVLLNQDMSFFDTYGN
NGDIVSQVLGDVLLIQSALSEKVGNYVHNMATFFGGLAVGFINSWQIALLTLATGPFIVA
AGGISNIFLHRLAENIQDAYAEAASIAEQAVGYIRTLYAFTNETLGKHSYANSLQATLSY
GVQISLVQGLGLGFTYGLAICSCALQLWFGRLLISKGKVSGGEVIAALFAIILSGLGLNQ
AATNFYSFEQGRIAAHRLFEMISRSPASNNRDGKVLNGVQGVIEFRNVYFSYLSRPDIPI
LSGFYLTVPAKKTVAIVGRNGSGKSSIIPLMENFYDPTLGEILLDGENIKNLNIEWLRKQ
IGLVTQEPALLSLSIKDNIIYGRANATMDQVEEAAKIAHAHTFISSLPNGYDTQITRSGL
SLTEEQKIKIAIARAVLCNPCILLLDEVTGELDIEAERAVQEALDILMLGRSTIIIARRL
SPIRNCDYIAVMEEGQLVEMGTHDELCTADGLYAELIQSEEVAKLPKRTPVRSYKLASFE
IEKDISATQSQDPSPVMSKSPSVQRYNGDYGLRQPDVNSDACNSAKLQGSPSEKTQENVA
LSDALMRMPSVRRQDSFGMCLPSLPRLDMQKIQCQSTNNSDPESPVSPLLSFDAKKEQSP
SKRCRKSSSCFDQSGVEEETSKNSQILQPPSVWRLAKLSSPEWLYALLGSVGAAIFGSFN
PLLALILVQIVEAYSRIHGKHAKHEVEKWCLLITSMGVATVIANFLQHFYFGIMGEKMTE
RIRRMMFSAILRNEVGWFDEEENNADSLSMRLANDATFVRAAFSNRMSILVQDATSVIVA
IAIGVMLEWRLALLALATLPLILVSAFAQKMWLAGFSGGIQEMHRKASLVLEDAVRNIYT
VVAFCAGKKVMKLYKVQLDCILTQSIYYSQLKGIAFGASQFLLFACNAFLLWYASMAIKR
GHGDIARILKEYMILSFVSFALVEPFGLAPYILKRRKSLVSVFGIIDRKPKIDSDDASGL
KLPNVYGTIELKNVDFHYPTRPEVTILSNFNLKVNGGQTVAVVGASGSGKSTLIALLERF
YDPVAGQIFLDGKDIRTLNLRWLRSHMGLVQQEPVLFSTSIRENIIYARHNASEAEMKEA
ARIANAHHFISSLPHGYDTHVGMRGIDLTPGQKQRIAIARVVLKNAPILLLDEASSNVES
ESSRVVQEALGTLILGNKTTLIIAHHFAMMRHVDTIVVLNDGRIIEEGTHDFLMEKNGLY
VRLMQRHFAKSRWQHRLF
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccaagggtttttttgggtggtcgccaccgcacatacagccattaacgcctgtt
tcagaggtctcggagccgcctgagtcgccgttgccgaattttgtggagggtgcacagatc
cctgacgatgatgagggcctcattgatttcactgaagaagaaatggaccctccccctgcg
gctgtgcctttcttaaggctttttgcgcacgcctctgcctttgattggtttcttatggtc
ctcggttcactggctgctgctgcgcacggtgctgctctagtcgtttatcttcactttttt
ggacagatcattgatttgttcactcttctcggccctccctttgaaagacatgaactgtat
cacaattttaccaagcatgctctgtatattgtttatatagctgcaggcgtatttgttgtt
gggtggattgaggtatcctgctggattctaactgcagagagacagacagctgtcattaga
gccaagtatgttcaagtattgttaaatcaggacatgagtttttttgatacttatggaaat
aatggagacattgtaagccaagtgttaggggatgtgcttctaattcaatctgcacttagt
gagaaggttggcaattatgtccataacatggcaacattttttggaggccttgctgtggga
tttataaatagctggcagatagctcttttgacattagctactggtccattcattgtggcc
gctggtggaatatcaaatatttttctccatagacttgctgaaaatattcaagatgcatat
gcagaagcagccagtattgcagagcaggcagttggatacatacggacattgtatgccttt
acaaatgagacattaggaaaacattcatatgcaaattcactccaggctacgttgagctat
ggtgtacaaataagtcttgtgcaagggcttggacttggcttcacatatgggttggctata
tgttcttgtgcactgcagctttggtttggaaggcttttgatctcaaaagggaaagtgagt
ggtggtgaggttattgcagccctttttgcaataattttgagtggcctaggtctgaatcaa
gcagctacaaacttttattcatttgagcaaggcaggattgcagcacacagactttttgag
atgataagccggtcacctgcaagcaataatcgagatgggaaagtattaaatggtgttcaa
ggagttattgagttccgtaatgtctactttagttatctctctcgtcctgatatcccaata
ttaagtggattttatctcactgtacctgccaaaaaaactgtagccattgttggcaggaat
ggttctggtaaaagtagtattattccattgatggagaatttttatgatcctactttggga
gaaattctgctggatggagaaaatatcaaaaatcttaacattgagtggttacgaaaacag
ataggattagtaactcaggagcctgctcttttaagtttaagcatcaaggataatattatt
tatggacgggcaaatgcaactatggatcaagttgaagaggcagcgaaaattgcacatgct
cacacattcattagctcacttcccaatggatatgatactcagattaccagaagtgggcta
tctttgactgaggaacaaaaaataaaaattgctattgctagagctgtgctgtgcaatcct
tgcattctgctgcttgatgaagtgactggtgaacttgatattgaggcagaacgtgctgtt
caagaagctttagacatactgatgttggggcgttcaactattatcatagctcgtcgtctt
agcccaattcgtaattgtgattatatagcagttatggaagagggccagcttgttgaaatg
ggcacacatgatgaattgtgcactgctgatggcttatatgctgaactcattcaatctgaa
gaggtggccaagcttcctaaaaggactccagtcagaagttataaattggcaagttttgaa
atagaaaaggatatatctgctactcaaagccaggatccatctcctgtaatgtcaaagtca
ccatctgttcaaagatataatggagactatggtttaaggcagcctgatgtgaattctgat
gcatgcaattcagcaaaattacagggttcaccatcagagaaaacacaagaaaatgtagct
ctatcagatgcactcatgagaatgccttctgtgaggagacaagatagctttggcatgtgt
ttgccatcattacctagactagatatgcagaaaattcaatgccaatcaacgaataattca
gatccagagtcacctgtttcacctcttttgtcattcgatgccaaaaaagaacaatcaccc
tcaaagagatgcagaaaatcttcttcttgctttgatcaatcaggcgtcgaagaggaaacc
tcaaaaaattcccaaattcttcagccaccatctgtatggagacttgcaaaattaagctct
ccagaatggctttatgctcttcttggtagtgtaggagctgccatttttggatctttcaat
ccgctacttgcattgattcttgttcagattgtggaggcatattcaagaatacatgggaag
catgccaaacatgaggtagaaaagtggtgcttgttaattacaagtatgggtgtggcaact
gtgatagcaaactttttgcaacacttttactttggtataatgggggagaagatgacagaa
cgcattcgtagaatgatgttttcagcaatattgcgaaatgaggttggctggtttgatgaa
gaagaaaacaatgcagattcattgtctatgcgattggcaaacgatgccacctttgttaga
gcagcatttagcaatcgcatgtcaattcttgtccaagatgctacatccgtcattgttgct
attgccattggagtgatgctggagtggcgcttggcacttctggcattggccaccttaccc
cttattttggtttcagcatttgcacagaaaatgtggcttgctggattctcagggggtatc
caagaaatgcataggaaggcttccttagttctggaggatgcagttagaaatatttatact
gttgttgcattttgtgctggaaaaaaggtgatgaaactctataaagtacagttggactgt
attcttacacagagcatttattattcacagctaaaaggaattgcttttggtgcatcacaa
tttcttctttttgcatgtaatgcttttctgctatggtatgcatccatggctatcaagagg
ggccatggtgacattgctagaatcttgaaagaatacatgatactttcatttgtatctttt
gcactggtagaaccttttggattagctccatacattttgaaacgccgcaagtcacttgtt
tcagtttttggaattattgatcggaaacctaagattgattcagatgatgcatctggattg
aagcttcctaatgtgtatggaacaattgagctgaaaaatgttgatttccattatccaacc
cgtccagaagtgacaattttaagtaatttcaacctcaaagtgaatggtggtcaaactgtt
gctgtagtgggagcttctggatcaggtaaaagcacattaattgcacttcttgagcgcttt
tatgacccggttgctggtcaaatttttctggatgggaaagatatcaggacgttaaacttg
cgctggcttcgaagtcatatgggtcttgttcaacaagagcctgttctcttctctacttcc
atacgggaaaatataatttatgctagacacaatgcaagtgaagctgagatgaaggaagca
gcgcggatagcaaatgcacatcacttcataagcagcttgccacatggatatgatacccat
gtcggtatgaggggcattgatctcactcctggtcagaagcaaagaattgctattgctaga
gttgttttgaagaatgcaccaatattgctgttggatgaggcaagctctaatgtggagtca
gagtctagccgtgtggtgcaagaagctttaggtacgttgatactggggaacaagacaaca
cttatcattgcacatcattttgcaatgatgcggcatgtagacacaattgttgtattaaat
gatggccgtattattgaagagggtactcatgattttctgatggaaaagaatggtctttat
gtgcgtctgatgcagcgtcattttgctaaatcccgttggcaacatagattgttttag
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integrated database retrieval system
