Cryptomeria japonica (Japanese cedar): 131049985
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Entry
131049985 CDS
T10556
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131049985
03036 Chromosome and associated proteins [BR:
cjf03036
]
131049985
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131049985
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Helicases
131049985
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
131049985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
131049985
NCBI-ProteinID:
XP_057840087
LinkDB
All DBs
Position
9:246021656..246034578
Genome browser
AA seq
701 aa
AA seq
DB search
MPALEVISAPKMESKKKSKHSPFSAEKKKKSSKTEEEENEEAEMGFERVNSKRKLSKSAA
GEEPSPKKKKKKKSWDSDVEEEKVAAQKYEVEKEDDDEDEGETEVENLNAVSNFNISEAL
RQKLKSKGIESLFPIQAMTFETIYKGFDLVGRARTGQGKTLAFVLPILESLTSGQYAKDR
NKSYGKLPSVIVLVPTRELAKQVHSDFEFYGGSVGINTCCVYGGAPYGPQENALRRGVDV
VVGTPGRIKDHIERGSLNLKSLKFRVLDEADEMLNMGFVEDVENILGKVEDVSKVQTLLF
SATMPNWVKQIASKFFKPDRKTADLVGDDKMKASTSIRHIVLPCFYKARATVIPDVIRCY
SSGGRSIVFTETKNDASELAESFPGKARALHGDIQQSQREVTLAGFRSGKFSILVATDVA
ARGLDINDVQLIIQCEPPRDVETYIHRSGRTGRAGNTGISVMLYDRKKQYMISQIEMKAG
VKFERASAPQPADIARASGLTAVDSIMGVADSVLPVFRQSAEELIKNSGVPAADIIAKAL
AKIAGYTEVKKRSLLSSQENNVTLILKSGKVMYSATYAFTTLRRIIPEDNMAGISGMSLT
VDGTAAVFDVPSEHVDLFLAGQNNADGIVIEVLESLPELQVRNDQSRGGGFGNGYGRGGR
GGNSNGRSWGGSRGGGSGSRRGGSGGSRGRGGSWGNQQKRW
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctttggaggtaatttctgctccgaaaatggagtccaagaagaaatctaaacac
agtcctttctctgccgagaaaaagaaaaagtcgtcaaagacagaggaagaagagaatgaa
gaggctgaaatgggattcgaacgcgtgaactctaagaggaaattatcgaagtcggcggcg
ggggaggagcccagccccaagaagaagaagaagaagaagagctgggacagtgatgttgaa
gaagaaaaagtagcagcgcaaaaatatgaagtagaaaaagaagatgatgacgaagacgaa
ggggaaacagaagtggagaacctgaatgccgtttctaattttaatatatcggaggcttta
aggcagaagttaaagtctaaaggaatcgagtcgctatttcccatacaagcaatgacgttt
gagactatatacaagggctttgatttggtgggtcgagctcgaactggacagggtaaaaca
ttggcatttgtgttgcctattttggagtcattaacaagtggacaatatgcaaaagatagg
aataagtcctatggaaagctacctagtgtgattgttttggttccaactcgggagcttgca
aaacaggttcattcagattttgagttttatggtggatctgttggcattaatacatgctgt
gtgtatggaggtgctccatatggtccgcaggaaaatgcactacgtagaggtgtagatgtt
gttgttggaacaccaggtcgtatcaaggatcatatcgagagagggagtcttaacttgaaa
tcattgaaatttcgtgtcctggatgaggctgatgaaatgcttaacatgggctttgtggag
gacgtggaaaacatccttggaaaagttgaggatgtgagtaaggttcaaacacttcttttt
agtgcaacaatgccgaattgggtaaagcagattgcatcaaaattcttcaagcctgataga
aaaactgcagatcttgttggtgatgataagatgaaggctagtacaagtataaggcacatt
gttcttccctgcttttacaaagcaagagcaacggttataccagatgtcattcgctgctac
agcagtgggggacgtagtattgtttttacagagacaaagaatgatgcatctgagcttgct
gaatcatttcctggtaaagctcgtgcattgcatggagatatacaacagtctcaacgtgaa
gttactcttgctggattccgttcaggaaaattttcaatacttgttgcaactgatgttgca
gcacggggtttggacattaatgatgttcaacttataattcagtgtgaacctcccagagat
gtggaaacttacattcatcgatctggacgtactggtagagcaggcaatactgggatttct
gtcatgctttatgatagaaagaaacaatatatgatatctcaaattgaaatgaaggctggt
gttaaatttgagcgtgcatctgcacctcagcctgcagatattgcaagagcttctggattg
actgctgtagatagcataatgggtgttgctgacagtgtacttcctgtttttaggcagtca
gctgaggaacttataaaaaatagtggggtccctgcggcagacattattgcaaaagcatta
gcaaaaattgctggatacacagaagtcaagaaaagatcgttgctctcttcacaagaaaat
aacgtgaccttgattcttaaatctggaaaggtcatgtactctgcaacatatgcgttcact
accctgcgaagaattatacctgaagacaacatggctggaatcagtgggatgtctcttact
gtagatgggactgctgctgtatttgatgtgcccagtgagcatgttgatctatttcttgca
ggccagaacaatgctgatgggattgtaattgaagtacttgaaagtttacctgagctgcaa
gttcgcaatgaccagtcaagagggggtgggtttggtaatggctatggcagaggaggtcga
ggaggaaattcaaatgggagatcttggggtggttcaaggggaggtggtagtggttctaga
cgtggcggcagtggtggttctagaggaagaggtggaagctggggaaatcagcaaaagcgc
tggtga
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